RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 DAB2P98082 770 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 MLLT1Q03111 559 aaPredicted RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 ZNF155Q12901 538 aaPredicted RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 CDK10Q15131 360 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 WSCD2Q2TBF2 565 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 DDI2Q5TDH0 399 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 LSRQ86X29 649 aaPredicted RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 CCDC116Q8IYX3 515 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 VWA5B2Q8N398 1253 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 CAMKK1Q8N5S9 505 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 TEX47Q8TBZ9 253 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 SFXN5Q8TD22 340 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 KLK6Q92876 244 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 KIAA1143Q96AT1 154 aaPredicted RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 BBS4Q96RK4 519 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 INSM2Q96T92 566 aaPredicted RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 ZNF649Q9BS31 505 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 SYNPO2LQ9H987 977 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 PLSCR3Q9NRY6 295 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 CNIH4Q9P003 139 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 EXOSC1Q9Y3B2 195 aaKnown RBP14.35□□□□□ -0.11
CNN3-207ENST00000545882 ATG4BQ9Y4P1 393 aa14.35□□□□□ -0.11
CNN3-207ENST00000545882 SCN3AQ9NY46 2000 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 SHISA3A0PJX4 238 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 IGLON5A6NGN9 336 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 FAM170BA6NMN3 283 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 SLC30A4O14863 429 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 ERAL1O75616 437 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 CSF2P04141 144 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 ZNF24P17028 368 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 APEX1P27695 318 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 GABRA5P31644 462 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 OMPP47874 163 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 PRDX1Q06830 199 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 TSPAN31Q12999 210 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 GPAT3Q53EU6 434 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 PYDC2Q56P42 97 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 PIP5KL1Q5T9C9 394 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 MRM1Q6IN84 353 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 ADCK2Q7Z695 626 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 ABI3BPQ7Z7G0 1075 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 VRK2Q86Y07 508 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 OR4Q3Q8NH05 313 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 OR8K5Q8NH50 307 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 DIO2Q92813 273 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 UFD1Q92890 307 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 ZNF707Q96C28 371 aaPredicted RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 FAM46AQ96IP4 442 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 FYTTD1Q96QD9 318 aaKnown RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 FERD3LQ96RJ6 166 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 TTYH2Q9BSA4 534 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 SLC38A1Q9H2H9 487 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 PPP1R3EQ9H7J1 279 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 ANKRA2Q9H9E1 313 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 RANGRFQ9HD47 186 aaPredicted RBP14.34□□□□□ -0.11
CNN3-207ENST00000545882 CES1P1Q9UKY3 287 aa14.34□□□□□ -0.11
CNN3-207ENST00000545882 TRDV1A0A1B0GX56 115 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 IRGMA1A4Y4 181 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 CCDC182A6NF36 153 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 C8orf89P0DMQ9 161 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 MYL9P24844 172 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 NTSP30990 170 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 TRHRP34981 398 aaPredicted RBP14.33□□□□□ -0.11
CNN3-207ENST00000545882 CHRNEQ04844 493 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 PDZK1Q5T2W1 519 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 TMEM107Q6UX40 140 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 RASSF6Q6ZTQ3 369 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 C11orf74Q86VG3 221 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 UBE2J2Q8N2K1 259 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 ARIH2OSQ8N7S6 290 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 ASCC1Q8N9N2 400 aaKnown RBP14.33□□□□□ -0.11
CNN3-207ENST00000545882 ATP6V1C2Q8NEY4 427 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 MS4A6EQ96DS6 147 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 OR7D2Q96RA2 312 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 MBNL1Q9NR56 388 aaKnown RBP14.33□□□□□ -0.11
CNN3-207ENST00000545882 WDR70Q9NW82 654 aa14.33□□□□□ -0.11
CNN3-207ENST00000545882 DNMT3AQ9Y6K1 912 aaPredicted RBP14.33□□□□□ -0.11
CNN3-207ENST00000545882 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 CPSF4LA6NMK7 179 aaKnown RBP14.33□□□□□ -0.12
CNN3-207ENST00000545882 AGRPO00253 132 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 SCO2O43819 266 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 ZIC2O95409 532 aaPredicted RBP14.33□□□□□ -0.12
CNN3-207ENST00000545882 HLA-DQB1P01920 261 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 THY1P04216 161 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 SLC35G4P0C7Q5 338 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 SLC1A3P43003 542 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 TAS2R41P59536 307 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 SLC9A5Q14940 896 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 Q5BKY6 102 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 ZNF311Q5JNZ3 666 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 CLEC12AQ5QGZ9 265 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 AADACL4Q5VUY2 407 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 C18orf63Q68DL7 685 aa14.33□□□□□ -0.12
CNN3-207ENST00000545882 SPRED2Q7Z698 418 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms