RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ABCB7O75027 752 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PDE9AO76083 593 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TMED10P49755 219 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CRISP3P54108 245 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 NRG3P56975 720 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 RNF4P78317 190 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 HPCAP84074 193 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PSG6Q00889 435 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 DUSP8Q13202 625 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TRIM25Q14258 630 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 BTBD16Q32M84 506 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PROSER1Q86XN7 944 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 C10orf67Q8IYJ2 551 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 MICU2Q8IYU8 434 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TAGAPQ8N103 731 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 HORMAD2Q8N7B1 307 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 COX18Q8N8Q8 333 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 HIPK4Q8NE63 616 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 JADE3Q92613 823 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 GATA6Q92908 595 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ADIPOR1Q96A54 375 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 C8orf44Q96CB5 159 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 MAGED4Q96JG8 741 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 RNF145Q96MT1 663 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 DEFB126Q9BYW3 111 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TRIM15Q9C019 465 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 FBXL4Q9UKA2 621 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 POLHQ9Y253 713 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ANGPT4Q9Y264 503 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 IGF2RP11717 2491 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 C5orf58C9J3I9 102 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 HRKO00198 91 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 RRP8O43159 456 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CIB2O75838 187 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 IFNA14P01570 189 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CT45A8P0DMV1 189 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CT45A9P0DMV2 189 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ETFAP13804 333 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 POU6F2P78424 691 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CEACAM7Q14002 265 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SELPLGQ14242 412 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TGIF1Q15583 401 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ZSWIM7Q19AV6 140 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ARHGAP11BQ3KRB8 267 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CT45A2Q5DJT8 189 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 DCAF10Q5QP82 559 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 REEP3Q6NUK4 255 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 H3F3CQ6NXT2 135 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 LRRC74BQ6ZQY2 392 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CCDC80Q76M96 950 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 C16orf62Q7Z3J2 963 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PATL1Q86TB9 770 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 C9orf40Q8IXQ3 194 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC5A8Q8N695 610 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 GOLM1Q8NBJ4 401 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CLEC1AQ8NC01 280 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC16A11Q8NCK7 471 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 BHLHE22Q8NFJ8 381 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 BBS10Q8TAM1 723 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 PNPT1Q8TCS8 783 aaKnown RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 RASSF5Q8WWW0 418 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC9A6Q92581 669 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SPATA5L1Q9BVQ7 753 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ITPAQ9BY32 194 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 SERHL2Q9H4I8 314 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TRIM45Q9H8W5 580 aaPredicted RBP14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 ATP13A2Q9NQ11 1180 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 EQTNQ9NQ60 294 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 TEKT2Q9UIF3 430 aa14.85□□□□□ -0.03
PRPF40A-212ENST00000545856 CPAMD8Q8IZJ3 1885 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 IGHV3-20A0A0C4DH32 117 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 TRBV11-1A0A0K0K1C0 115 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 MYOCOSA0A1B0GUC4 107 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 TFPTP0C1Z6 253 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ACP2P11117 423 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ETS2P15036 469 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 PIGAP37287 484 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 CDK6Q00534 326 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ADRM1Q16186 407 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 DUSP5Q16690 384 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 DECR1Q16698 335 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 COX20Q5RI15 118 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 IRAK1BP1Q5VVH5 260 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 TNFAIP8L2Q6P589 184 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 KRT73Q86Y46 540 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 PTOV1Q86YD1 416 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ZZZ3Q8IYH5 903 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 EID3Q8N140 333 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 SLC22A8Q8TCC7 542 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 GPR151Q8TDV0 419 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 C16orf58Q96GQ5 468 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 EVA1AQ9H8M9 152 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 GORASP2Q9H8Y8 452 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF160Q9HCG1 818 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ACTR3BQ9P1U1 418 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 ZNF223Q9UK11 482 aaPredicted RBP14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 CBLCQ9ULV8 474 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 OR10H1Q9Y4A9 318 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms