RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 DLG1Q12959 904 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 KRTAP24-1Q3LI83 254 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 CHMP1BQ7LBR1 199 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
RTN3-214ENST00000545432 COL21A1Q96P44 957 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 GRIP2Q9C0E4 1043 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 SLCO5A1Q9H2Y9 848 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 YAE1D1Q9NRH1 226 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 PROCRQ9UNN8 238 aa13.23□□□□□ -0.29
RTN3-214ENST00000545432 A8MV72 311 aaPredicted RBP13.22□□□□□ -0.29
RTN3-214ENST00000545432 GBAP04062 536 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 STMN1P16949 149 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 KCNJ5P48544 419 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 SIRPAP78324 504 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 VEZF1Q14119 521 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 NNATQ16517 81 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 SLC48A1Q6P1K1 146 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.22□□□□□ -0.29
RTN3-214ENST00000545432 METTL25Q8N6Q8 603 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 FBXO36Q8NEA4 188 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 FNDC9Q8TBE3 224 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 AKAP1Q92667 903 aaKnown RBP eCLIP13.22□□□□□ -0.29
RTN3-214ENST00000545432 PLPPR2Q96GM1 343 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 ZNF681Q96N22 645 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 BTBD9Q96Q07 612 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 KLHL4Q9C0H6 718 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 PRODH2Q9UF12 536 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 LAMP3Q9UQV4 416 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 ACOT9Q9Y305 439 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 PLLPQ9Y342 182 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 PCDHA9Q9Y5H5 950 aa13.22□□□□□ -0.29
RTN3-214ENST00000545432 EFCAB8A8MWE9 144 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 CXorf49A8MYA2 514 aaPredicted RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 H0YC42 278 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 KERAO60938 352 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 SOD3P08294 240 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 CT45A8P0DMV1 189 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 CT45A9P0DMV2 189 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 PSMB1P20618 241 aaKnown RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 GRK2P25098 689 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 TPD52P55327 224 aaPredicted RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 ARL4CP56559 192 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 GPX6P59796 221 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 RAB10P61026 200 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 PSPHP78330 225 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 PHEXP78562 749 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 EFR3AQ14156 821 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 FASTKD3Q14CZ7 662 aaKnown RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 EXOSC7Q15024 291 aaKnown RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 GLYR1Q49A26 553 aaPredicted RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 TRMT12Q53H54 448 aaKnown RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 CT45A2Q5DJT8 189 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 ANKMY2Q8IV38 441 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 SPC24Q8NBT2 197 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 TMBIM1Q969X1 311 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 ZBED6CLQ96FA7 236 aaPredicted RBP13.21□□□□□ -0.29
RTN3-214ENST00000545432 SERPINI1Q99574 410 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 RBBP8Q99708 897 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 PINK1Q9BXM7 581 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 ALG9Q9H6U8 611 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 EHD3Q9NZN3 535 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 GPR52Q9Y2T5 361 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 ZNF337Q9Y3M9 751 aa13.21□□□□□ -0.29
RTN3-214ENST00000545432 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 C1orf226A1L170 272 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 UBXN8O00124 270 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 REM1O75628 298 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 PIAS1O75925 651 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 AQP8O94778 261 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 ACVR1BP36896 505 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 NEK2P51955 445 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 PNLIPRP2P54317 469 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 DUSP2Q05923 314 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 PON3Q15166 354 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.2□□□□□ -0.3
RTN3-214ENST00000545432 C6orf163Q5TEZ5 329 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 OR5M10Q6IEU7 315 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 METTL2BQ6P1Q9 378 aaKnown RBP13.2□□□□□ -0.3
RTN3-214ENST00000545432 OR52R1Q8NGF1 315 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 RHEBL1Q8TAI7 183 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 ZNF675Q8TD23 568 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 ERP27Q96DN0 273 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
RTN3-214ENST00000545432 CPNE1Q99829 537 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 DDX47Q9H0S4 455 aaKnown RBP13.2□□□□□ -0.3
RTN3-214ENST00000545432 NMRAL1Q9HBL8 299 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 CDC42EP3Q9UKI2 254 aa13.2□□□□□ -0.3
RTN3-214ENST00000545432 CADP27708 2225 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 GOLGA6L10A6NI86 522 aa13.19□□□□□ -0.3
RTN3-214ENST00000545432 SS18L1O75177 396 aaPredicted RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 BCAS2O75934 225 aaPredicted RBP13.19□□□□□ -0.3
RTN3-214ENST00000545432 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms