RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 NCLNQ969V3 563 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 MRPL24Q96A35 216 aaKnown RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 MAGED4Q96JG8 741 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ACCSQ96QU6 501 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 RAB40CQ96S21 281 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF416Q9BWM5 594 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 PITPNM3Q9BZ71 974 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 RIBC2Q9H4K1 309 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 GDF3Q9NR23 364 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 MED17Q9NVC6 651 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ERVK-18Q9QC07 812 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 MIOXQ9UGB7 285 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 XPO7Q9UIA9 1087 aaKnown RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 RNF115Q9Y4L5 304 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZHX2Q9Y6X8 837 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 PLXNA1Q9UIW2 1896 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 SSC5DA1L4H1 1573 aa3.51□□□□□ -1.85
SNHG1-222ENST00000545308 RPAP1Q9BWH6 1393 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-222ENST00000545308 COL2A1P02458 1487 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TRIM49BA6NDI0 452 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TRIM64CA6NLI5 447 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 BMPR1BO00238 502 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 CCSO14618 274 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 ARPC1BO15143 372 aaKnown RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 CSDE1O75534 798 aaKnown RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TOM1L1O75674 476 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 PRAMEF12O95522 483 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 HPRP00739 348 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 PCCBP05166 539 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 KRT8P05787 483 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 CA3P07451 260 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 LYNP07948 512 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 PRSS56P0CW18 603 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 RRASP10301 218 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 GIFP27352 417 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 FCGR2BP31994 310 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 MTIF2P46199 727 aaKnown RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 GUCY2DQ02846 1103 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 RIGQ13278 110 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 KLF5Q13887 457 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 MTF1Q14872 753 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TEAD2Q15562 447 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 ZKSCAN8Q15776 578 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 LRRC26Q2I0M4 334 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 FFAR4Q5NUL3 377 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 KDELC1Q6UW63 502 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 CES3Q6UWW8 571 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 Q6ZRG5 221 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 LCA5Q86VQ0 697 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 HOGA1Q86XE5 327 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 APLFQ8IW19 511 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 COLGALT1Q8NBJ5 622 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 ZNF397Q8NF99 534 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 OR4D10Q8NGI6 311 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 LIPHQ8WWY8 451 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TMEM37Q8WXS4 190 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 THRSPQ92748 146 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 FICDQ9BVA6 458 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 TPPP3Q9BW30 176 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 NLNQ9BYT8 704 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 NACA2Q9H009 215 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 RAB33BQ9H082 229 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 GTSE1Q9NYZ3 720 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 P2RX2Q9UBL9 471 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 CHRNA9Q9UGM1 479 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 FOXJ3Q9UPW0 622 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 WDR37Q9Y2I8 494 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 C2CD2Q9Y426 696 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 KLF2Q9Y5W3 355 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-222ENST00000545308 PTPRFP10586 1907 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 RLFQ13129 1914 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 WDR81Q562E7 1941 aa3.5□□□□□ -1.85
SNHG1-222ENST00000545308 MUC6Q6W4X9 2439 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 MYH13Q9UKX3 1938 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 RNF222A6NCQ9 220 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 ANKRD30BLA7E2S9 258 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 NPIPB9F8W1W9 429 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 LGALS8O00214 317 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 MPHOSPH10O00566 681 aaKnown RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 SH2D1BO14796 132 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 SURF4O15260 269 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 KIAA0513O60268 411 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 LMX1BO60663 402 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 KRT36O76013 467 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 ANXA9O76027 345 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 PRSS1P07477 247 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 CALCBP10092 127 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 SELEP16581 610 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 CYP2B6P20813 491 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 EDNRAP25101 427 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 TMOD1P28289 359 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 PPP2R1AP30153 589 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 MAT2AP31153 395 aaKnown RBP3.49□□□□□ -1.85
SNHG1-222ENST00000545308 PRPHP41219 470 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 PAX9P55771 341 aa3.49□□□□□ -1.85
SNHG1-222ENST00000545308 RPL27P61353 136 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms