RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SATB2Q9UPW6 733 aa28.31■■■□□ 2.12
CCM2-219ENST00000544363 EP300Q09472 2414 aaPredicted RBP28.31■■■□□ 2.12
CCM2-219ENST00000544363 CCDC187A0A096LP49 1063 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 GABRA3P34903 492 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 LIMK1P53667 647 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 EIF3IQ13347 325 aaKnown RBP28.3■■■□□ 2.12
CCM2-219ENST00000544363 ZNHIT3Q15649 155 aaPredicted RBP28.3■■■□□ 2.12
CCM2-219ENST00000544363 IFI44LQ53G44 452 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 OR14A16Q8NHC5 309 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 RASSF5Q8WWW0 418 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 DAZLQ92904 295 aaKnown RBP28.3■■■□□ 2.12
CCM2-219ENST00000544363 SPSB2Q99619 263 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 BDH2Q9BUT1 245 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 SPATA5L1Q9BVQ7 753 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 KLHL4Q9C0H6 718 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 PISDQ9UG56 409 aa28.3■■■□□ 2.12
CCM2-219ENST00000544363 PEX1O43933 1283 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 FABP3P05413 133 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 CD247P20963 164 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 HPCAP84074 193 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 CHRNEQ04844 493 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DUSP7Q16829 419 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 LANCL3Q6ZV70 420 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 C16orf52Q8NHV5 167 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 PIK3R3Q92569 461 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 MR1Q95460 341 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 SDF2Q99470 211 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DDA1Q9BW61 102 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 WDR54Q9H977 334 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DNAJB9Q9UBS3 223 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 SEC14L3Q9UDX4 400 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 PRODH2Q9UF12 536 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 GPN3Q9UHW5 284 aaPredicted RBP28.29■■■□□ 2.12
CCM2-219ENST00000544363 MUC6Q6W4X9 2439 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DSPPQ9NZW4 1301 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 PLD2O14939 933 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 ALOX12BO75342 701 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DKK1O94907 266 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DDAH2O95865 285 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 AK1P00568 194 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 CST1P01037 141 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 EMP2P54851 167 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 PSG6Q00889 435 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 GRAMD1BQ3KR37 738 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DCST2Q5T1A1 773 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 FAAH2Q6GMR7 532 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 ZNF517Q6ZMY9 492 aaPredicted RBP28.29■■■□□ 2.12
CCM2-219ENST00000544363 PIWIL3Q7Z3Z3 882 aaKnown RBP28.29■■■□□ 2.12
CCM2-219ENST00000544363 ICA1LQ8NDH6 482 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 CATSPER1Q8NEC5 780 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 SPPL2AQ8TCT8 520 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 SLC2A12Q8TD20 617 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 C7orf34Q96L11 122 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 ART5Q96L15 291 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 BAG5Q9UL15 447 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 DTX4Q9Y2E6 619 aa28.29■■■□□ 2.12
CCM2-219ENST00000544363 PMS2P1A4D2B8 440 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 TTC36A6NLP5 189 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 IGKV3-11P04433 115 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 SLC37A1P57057 533 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 POU6F2P78424 691 aaPredicted RBP28.28■■■□□ 2.12
CCM2-219ENST00000544363 VLDLRP98155 873 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 FAM199XQ6PEV8 388 aaPredicted RBP28.28■■■□□ 2.12
CCM2-219ENST00000544363 GALNT6Q8NCL4 622 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 ZNF721Q8TF20 911 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 EME1Q96AY2 570 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 OR8D2Q9GZM6 311 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 C3orf18Q9UK00 162 aa28.28■■■□□ 2.12
CCM2-219ENST00000544363 NXT1Q9UKK6 140 aaKnown RBP28.28■■■□□ 2.12
CCM2-219ENST00000544363 FCMRO60667 390 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 PRSS23O95084 383 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 ZIC2O95409 532 aaPredicted RBP28.27■■■□□ 2.12
CCM2-219ENST00000544363 CYC1P08574 325 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 SLC5A2P31639 672 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 KCNJ5P48544 419 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 FRRS1Q6ZNA5 592 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 ANKRD37Q7Z713 158 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 GPR32P1Q8NGA4 272 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 METTL21AQ8WXB1 218 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 GEMIN6Q8WXD5 167 aaKnown RBP28.27■■■□□ 2.12
CCM2-219ENST00000544363 RSPO3Q9BXY4 272 aaPredicted RBP28.27■■■□□ 2.12
CCM2-219ENST00000544363 NTN4Q9HB63 628 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 PADI2Q9Y2J8 665 aa28.27■■■□□ 2.12
CCM2-219ENST00000544363 GXYLT2A0PJZ3 443 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 hCG_2039718K7EN88 272 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 STK17BO94768 372 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 FESP07332 822 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 FAM198BQ6UWH4 519 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 ZNF321PQ8N8H1 164 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 VPS50Q96JG6 964 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 CRB3Q9BUF7 120 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 ZNF350Q9GZX5 532 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 ABCG2Q9UNQ0 655 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 WDR45Q9Y484 360 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 DTNAQ9Y4J8 743 aa28.26■■■□□ 2.11
CCM2-219ENST00000544363 TEX51A0A1B0GUA7 166 aa28.25■■■□□ 2.11
CCM2-219ENST00000544363 A0A1W2PNU3 283 aaPredicted RBP28.25■■■□□ 2.11
CCM2-219ENST00000544363 C9J4A7 227 aa28.25■■■□□ 2.11
CCM2-219ENST00000544363 FTH1P19P0C7X4 201 aa28.25■■■□□ 2.11
CCM2-219ENST00000544363 TNFRSF1BP20333 461 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms