RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 TAOK1Q7L7X3 1001 aa20.49■□□□□ 0.87
CDKN3-207ENST00000543789 CNRIP1Q96F85 164 aaPredicted RBP20.49■□□□□ 0.87
CDKN3-207ENST00000543789 WFIKKN1Q96NZ8 548 aa20.49■□□□□ 0.87
CDKN3-207ENST00000543789 ADOQ96SZ5 270 aa20.49■□□□□ 0.87
CDKN3-207ENST00000543789 NMRK1Q9NWW6 199 aa20.49■□□□□ 0.87
CDKN3-207ENST00000543789 C6orf203Q9P0P8 240 aaPredicted RBP20.49■□□□□ 0.87
CDKN3-207ENST00000543789 WIF1Q9Y5W5 379 aa20.49■□□□□ 0.87
CDKN3-207ENST00000543789 CTIFO43310 598 aaKnown RBP20.48■□□□□ 0.87
CDKN3-207ENST00000543789 ZIC3O60481 467 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 SMIM24O75264 130 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 SMNDC1O75940 238 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDKN3-207ENST00000543789 LY6G6DO95868 133 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 PDYNP01213 254 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 CRHP06850 196 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 TRA2BP62995 288 aaKnown RBP20.48■□□□□ 0.87
CDKN3-207ENST00000543789 MRPS35P82673 323 aaKnown RBP20.48■□□□□ 0.87
CDKN3-207ENST00000543789 BCL2A1Q16548 175 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 Q5PR19 223 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 OR5M10Q6IEU7 315 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 CHMP1BQ7LBR1 199 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 P4HA3Q7Z4N8 544 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 SELENOMQ8WWX9 145 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 STARD4Q96DR4 205 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 SLC35A4Q96G79 324 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 BRF2Q9HAW0 419 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 ZNF226Q9NYT6 803 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 DKKL1Q9UK85 242 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 UTS2RQ9UKP6 389 aa20.48■□□□□ 0.87
CDKN3-207ENST00000543789 HCRTR2O43614 444 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 BCAS2O75934 225 aaPredicted RBP20.47■□□□□ 0.87
CDKN3-207ENST00000543789 OTCP00480 354 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 CT45A8P0DMV1 189 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 CT45A9P0DMV2 189 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 MC3RP41968 323 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 EFR3AQ14156 821 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 CT45A2Q5DJT8 189 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 OR2A2Q6IF42 318 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 CCDC116Q8IYX3 515 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 BTBD9Q96Q07 612 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 PFDN4Q9NQP4 134 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 XPR1Q9UBH6 696 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 SNX6Q9UNH7 406 aa20.47■□□□□ 0.87
CDKN3-207ENST00000543789 MED12Q93074 2177 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 DEFB108AA8MXU0 73 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 TSPAN2O60636 221 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 ESRRBO95718 433 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 TCEA1P23193 301 aaKnown RBP20.46■□□□□ 0.87
CDKN3-207ENST00000543789 DPP4P27487 766 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 PHBP35232 272 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 KRT20P35900 424 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 ZNF628Q5EBL2 1059 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 LETMD1Q6P1Q0 360 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 PRSS57Q6UWY2 283 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 RPS27LQ71UM5 84 aaKnown RBP20.46■□□□□ 0.87
CDKN3-207ENST00000543789 C1orf52Q8N6N3 182 aaKnown RBP20.46■□□□□ 0.87
CDKN3-207ENST00000543789 GBP7Q8N8V2 638 aaPredicted RBP20.46■□□□□ 0.87
CDKN3-207ENST00000543789 CNEP1R1Q8N9A8 125 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 ZNF675Q8TD23 568 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 NUDT8Q8WV74 236 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 ERP27Q96DN0 273 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 COX4I2Q96KJ9 171 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 FAM111AQ96PZ2 611 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 ANKRA2Q9H9E1 313 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 GRPEL1Q9HAV7 217 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 KLHL28Q9NXS3 571 aa20.46■□□□□ 0.87
CDKN3-207ENST00000543789 DOCK7Q96N67 2140 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 SLC22A20A6NK97 555 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 H7C1Q1 480 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 PPP6CO00743 305 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 SIAH2O43255 324 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 FPR1P21462 350 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 GRK2P25098 689 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 IL12BP29460 328 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 CD79BP40259 229 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 CORO7P57737 925 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 PSPHP78330 225 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 ACKR1Q16570 336 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 LARP4Q71RC2 724 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDKN3-207ENST00000543789 CIARTQ8N365 385 aaPredicted RBP20.45■□□□□ 0.86
CDKN3-207ENST00000543789 PGM2Q96G03 612 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 MED18Q9BUE0 208 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 BDH2Q9BUT1 245 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 HEY2Q9UBP5 337 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 VPS29Q9UBQ0 182 aa20.45■□□□□ 0.86
CDKN3-207ENST00000543789 NME6O75414 186 aaPredicted RBP20.44■□□□□ 0.86
CDKN3-207ENST00000543789 RPS17P08708 135 aaKnown RBP20.44■□□□□ 0.86
CDKN3-207ENST00000543789 PEPDP12955 493 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 MAGEA12P43365 314 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 PNLIPRP2P54317 469 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 GAS1P54826 345 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 CDH13P55290 713 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 DSCR4P56555 118 aaPredicted RBP20.44■□□□□ 0.86
CDKN3-207ENST00000543789 B3GALT5-AS1P59052 145 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 ERCC6LQ2NKX8 1250 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 TSNAXIP1Q2TAA8 658 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 VWA1Q6PCB0 445 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 ZNF474Q6S9Z5 364 aaPredicted RBP20.44■□□□□ 0.86
CDKN3-207ENST00000543789 BTLAQ7Z6A9 289 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 OR4K17Q8NGC6 315 aa20.44■□□□□ 0.86
CDKN3-207ENST00000543789 RNF138Q8WVD3 245 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms