RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GAS1P54826 345 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 KRTAP10-9P60411 292 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PSG6Q00889 435 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PLCXD2Q0VAA5 305 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 EIPR1Q53HC9 387 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DCST1Q5T197 706 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 WDR93Q6P2C0 686 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 MEX3BQ6ZN04 569 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 GDF7Q7Z4P5 450 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 RIBC1Q8N443 379 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 CCDC63Q8NA47 563 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 OR4N2Q8NGD1 307 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 LURAP1Q96LR2 239 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 AMDHD1Q96NU7 426 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 COL21A1Q96P44 957 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 TRMOQ9BU70 441 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PRDM14Q9GZV8 571 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 EXO5Q9H790 373 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 KCNJ16Q9NPI9 418 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 RRAGDQ9NQL2 400 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PFDN4Q9NQP4 134 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SLC17A7Q9P2U7 560 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 C19orf53Q9UNZ5 99 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 SLC6A5Q9Y345 797 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 DNAJC15Q9Y5T4 150 aa11.96□□□□□ -0.49
TNFRSF1A-215ENST00000543359 PCNX3Q9H6A9 2034 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FAM90A27PA6NNH2 459 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 AHRRA9YTQ3 701 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TMEM233B4DJY2 109 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 UPK1AO00322 258 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GNB5O14775 395 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SEC22BO75396 215 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ERN1O75460 977 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 JUNP05412 331 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CHRNGP07510 517 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GABRA1P14867 456 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 BMP7P18075 431 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ELAVL4P26378 380 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZFP36L2P47974 494 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MASP1P48740 699 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IMPG1Q17R60 797 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RIPPLY2Q5TAB7 128 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 KANK2Q63ZY3 851 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 EMBQ6PCB8 327 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 POMZP3Q6PJE2 187 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ANGPTL8Q6UXH0 198 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IKBIPQ70UQ0 350 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FAM9CQ8IZT9 166 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 LIX1Q8N485 282 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FAM83FQ8NEG4 500 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR1J4Q8NGS1 313 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CAVIN3Q969G5 261 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 WDYHV1Q96HA8 205 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 FAM111AQ96PZ2 611 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 BBS4Q96RK4 519 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ADOQ96SZ5 270 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MECRQ9BV79 373 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OSBPL11Q9BXB4 747 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 UGT2B28Q9BY64 529 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ROPN1BQ9BZX4 212 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 METTL7AQ9H8H3 244 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ROPN1Q9HAT0 212 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 C1orf109Q9NX04 203 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ALKBH4Q9NXW9 302 aa11.95□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ZNF469Q96JG9 3925 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 AKAP6Q13023 2319 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 C15orf38-AP3S2A0A0A6YYH1 394 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PRAMEF25A6NGN4 478 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SLC28A1O00337 649 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NPHS1O60500 1241 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ABCB7O75027 752 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SPAG7O75391 227 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CRCPO75575 148 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 REM1O75628 298 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 SLITRK5O94991 958 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 EPPINO95925 133 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 IFI6P09912 130 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CEACAM8P31997 349 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MAP3K8P41279 467 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 MC3RP41968 323 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NCBP2P52298 156 aaKnown RBP eCLIP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 DLX5P56178 289 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 RFTN2Q52LD8 501 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 ARL13AQ5H913 290 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 WIPI1Q5MNZ9 446 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 TMEM107Q6UX40 140 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 YRDCQ86U90 279 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 NAXEQ8NCW5 288 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 OR10Q1Q8NGQ4 319 aa11.94□□□□□ -0.5
TNFRSF1A-215ENST00000543359 CDC26Q8NHZ8 85 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms