RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 SLC22A18Q96BI1 424 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 KLHL31Q9H511 634 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 GPN2Q9H9Y4 310 aaPredicted RBP15.2■□□□□ 0.02
VARS2-212ENST00000542001 ASXL3Q9C0F0 2248 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 CLDN24A6NM45 220 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 FAM155AB1AL88 458 aaPredicted RBP15.2■□□□□ 0.02
VARS2-212ENST00000542001 GFYI3L273 518 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 XKRYO14609 159 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ORC5O43913 435 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ARAFP10398 606 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 GJA4P35212 333 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 SLC6A12P48065 614 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 TAF13Q15543 124 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 CDKL4Q5MAI5 379 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 FAM111BQ6SJ93 734 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 NRARPQ7Z6K4 114 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 METTL4Q8N3J2 472 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 ZNF676Q8N7Q3 588 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 SUN3Q8TAQ9 357 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 GPR174Q9BXC1 333 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 SAP130Q9H0E3 1048 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 NANSQ9NR45 359 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 TRPM6Q9BX84 2022 aa15.2■□□□□ 0.02
VARS2-212ENST00000542001 C1orf226A1L170 272 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 ANKRD28O15084 1053 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 ITGAMP11215 1152 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 DRD5P21918 477 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 TMEM150AQ86TG1 271 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 LAX1Q8IWV1 398 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 NRSN1Q8IZ57 195 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 LRRC25Q8N386 305 aaPredicted RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 ZMYND19Q96E35 227 aaPredicted RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 MSLNLQ96KJ4 702 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 FOXN4Q96NZ1 517 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 NDC1Q9BTX1 674 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 RBM38Q9H0Z9 239 aaKnown RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 DDX31Q9H8H2 851 aaKnown RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 MYNNQ9NPC7 610 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 CENPMQ9NSP4 180 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 OR51B4Q9Y5P0 310 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 IRGMA1A4Y4 181 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 SMU1Q2TAY7 513 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 TMEM215Q68D42 235 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 ABHD13Q7L211 337 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 CHCHD4Q8N4Q1 142 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 PROKR2Q8NFJ6 384 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 RHOXF1Q8NHV9 184 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 HSFX1Q9UBD0 423 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 CACNA1EQ15878 2313 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 FAM180AQ6UWF9 173 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 CHST4Q8NCG5 386 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 CHTF18Q8WVB6 975 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 SMPDL3BQ92485 455 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 DPYSL5Q9BPU6 564 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 MKKSQ9NPJ1 570 aaPredicted RBP15.19■□□□□ 0.02
VARS2-212ENST00000542001 HSPE1-MOB4S4R3N1 261 aa15.19■□□□□ 0.02
VARS2-212ENST00000542001 A0A1W2PQ09 198 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 UPK1BO75841 260 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PRSS23O95084 383 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 ZNF3P17036 446 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 EIF4HQ15056 248 aaKnown RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 GXYLT1Q4G148 440 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 AKIRIN2Q53H80 203 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 SLC7A13Q8TCU3 470 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PATE1Q8WXA2 126 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TRIM63Q969Q1 353 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 ALG14Q96F25 216 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 RHPN2P1A8MT19 583 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 EIF1AYO14602 144 aaKnown RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 SLC16A6O15403 523 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TMPRSS11DO60235 418 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 HIST1H1TP22492 207 aaPredicted RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 LBX1P52954 281 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PRSS36Q5K4E3 855 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 METTL2BQ6P1Q9 378 aaKnown RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 MSANTD1Q6ZTZ1 278 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 GJD3Q8N144 294 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 OR52E2Q8NGJ4 325 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 OR56A3Q8NH54 315 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 SPPL3Q8TCT6 385 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 OSTF1Q92882 214 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 GSDMCQ9BYG8 508 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TAAR2Q9P1P5 351 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PSORS1C1Q9UIG5 152 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 WDR37Q9Y2I8 494 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TRAV27A0A087WT01 109 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 TCRBV21S2A2A0A5A6 115 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 SGK494L7N484 410 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 GAPDHSO14556 408 aaPredicted RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 LCMT2O60294 686 aaKnown RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 PRAMEF4O60810 478 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 FBXO45P0C2W1 286 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 MAN2A2P49641 1150 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PRDX1Q06830 199 aaKnown RBP15.18■□□□□ 0.02
VARS2-212ENST00000542001 KIAA0040Q15053 153 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 LRIF1Q5T3J3 769 aa15.18■□□□□ 0.02
VARS2-212ENST00000542001 PRAMEF9Q5VWM5 478 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms