RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TRA2AQ13595 282 aaKnown RBP eCLIP7.82□□□□□ -1.163e-6■■□□□ 13.9
CHD4-208ENST00000540960 CLPPQ16740 277 aaPredicted RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 LRRC36Q1X8D7 754 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 ATAD3BQ5T9A4 648 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TTC23Q5W5X9 447 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 LPCAT4Q643R3 524 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 MRM1Q6IN84 353 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 KRT80Q6KB66 452 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 REEP3Q6NUK4 255 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TLDC1Q6P9B6 456 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CEACAM20Q6UY09 585 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CBLL1Q75N03 491 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 RNF44Q7L0R7 432 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CNTRLQ7Z7A1 2325 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CYP4Z1Q86W10 505 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 ARMC8Q8IUR7 673 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 ZZZ3Q8IYH5 903 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 OR4D9Q8NGE8 314 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 OR5K1Q8NHB7 308 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 CCL4L1Q8NHW4 92 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 TANKQ92844 425 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 MIEF2Q96C03 454 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 AURKBQ96GD4 344 aaPredicted RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 CCDC120Q96HB5 630 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 OR2A5Q96R48 311 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SEPHS2Q99611 448 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 DPYSL5Q9BPU6 564 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 DOHHQ9BU89 302 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 SPNS1Q9H2V7 528 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 A4GALTQ9NPC4 353 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 PRDM7Q9NQW5 492 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 RYDENQ9NUL5 291 aaKnown RBP7.82□□□□□ -1.16
CHD4-208ENST00000540960 SPHK1Q9NYA1 384 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 C3orf18Q9UK00 162 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 UTS2RQ9UKP6 389 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 POMT2Q9UKY4 750 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 B3GNT3Q9Y2A9 372 aa7.82□□□□□ -1.16
CHD4-208ENST00000540960 RHPN2P1A8MT19 583 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 MYO1GB0I1T2 1018 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 HAX1O00165 279 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 EMC8O43402 210 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PROM1O43490 865 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SH3BGRLO75368 114 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PRKD3O94806 890 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF682O95780 498 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ALBP02768 609 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 FABP3P05413 133 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF23P17027 643 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF26P17031 533 aaPredicted RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 CDH3P22223 829 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CPN2P22792 545 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CDKN2CP42773 168 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 MAGEA2P43356 314 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CCT3P49368 545 aaKnown RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 ERFP50548 548 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ALDH3A2P51648 485 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CHN2P52757 468 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ADAM8P78325 824 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 BTN3A2P78410 334 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 GPLD1P80108 840 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 IL18R1Q13478 541 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 BLMHQ13867 455 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SCARB2Q14108 478 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SELPLGQ14242 412 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PDK3Q15120 406 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZSWIM7Q19AV6 140 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 IFI44LQ53G44 452 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SNAP47Q5SQN1 464 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 YOD1Q5VVQ6 348 aaPredicted RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 SAXO2Q658L1 398 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SLC48A1Q6P1K1 146 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 FBXO42Q6P3S6 717 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZCCHC12Q6PEW1 402 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CLEC9AQ6UXN8 241 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 KMT5CQ86Y97 462 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PLXDC1Q8IUK5 500 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CLECL1Q8IZS7 167 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 LILRA2Q8N149 483 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CLEC4FQ8N1N0 589 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 RNF175Q8N4F7 328 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 DHRSXQ8N5I4 330 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 CSNK1A1LQ8N752 337 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF555Q8NEP9 628 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 OR4K14Q8NGD5 310 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 FBXO30Q8TB52 745 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 GEMIN6Q8WXD5 167 aaKnown RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 N4BP2L2Q92802 583 aaPredicted RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 RELTQ969Z4 430 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 VPS50Q96JG6 964 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF570Q96NI8 536 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 PELOQ9BRX2 385 aaKnown RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 ZNF717Q9BY31 904 aaPredicted RBP7.81□□□□□ -1.16
CHD4-208ENST00000540960 PIF1Q9H611 641 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 COQ10BQ9H8M1 238 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 REEP1Q9H902 201 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 ANKHQ9HCJ1 492 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 EXD2Q9NVH0 621 aa7.81□□□□□ -1.16
CHD4-208ENST00000540960 SMPD3Q9NY59 655 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms