RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 MLLT1Q03111 559 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 POU4F2Q12837 409 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 SLC14A1Q13336 389 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 IRF4Q15306 451 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 B3GNTL1Q67FW5 361 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 OR5M10Q6IEU7 315 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 LGI4Q8N135 537 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ZFP41Q8N8Y5 198 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 OR10H5Q8NGA6 315 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 OR9Q2Q8NGE9 314 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 RPLP0P6Q8NHW5 317 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 HHIPQ96QV1 700 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 GSDMCQ9BYG8 508 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 TGIF2Q9GZN2 237 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 AKAP7Q9P0M2 348 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 NUP205Q92621 2012 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 FXYD6-FXYD2A0A087WZ82 144 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 A0A0U1RQF3 1178 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ABHD14A-ACY1A0A1B0GW23 586 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 M0QYT0 321 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ZNF593O00488 134 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 UBE2CO00762 179 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 PIP5K1CO60331 668 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 PRAMEF2O60811 474 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 FZD7O75084 574 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ANKRD34CP0C6C1 535 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 PEPDP12955 493 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 MST1P26927 711 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 CALCRP30988 508 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 SLC6A4P31645 630 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 RGS4P49798 205 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 NDUFV1P49821 464 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 GATMP50440 423 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 TPI1P60174 286 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 SYTL3Q4VX76 610 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 TEX30Q5JUR7 227 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 C9orf57Q5W0N0 161 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 Q6ZTK2 550 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ZNF551Q7Z340 670 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 BCDIN3DQ7Z5W3 292 aaKnown RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 NUDT13Q86X67 352 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 GPR135Q8IZ08 494 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 C11orf84Q9BUA3 381 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 JAM3Q9BX67 310 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 FXYD6Q9H0Q3 95 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 REEP4Q9H6H4 257 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 NANSQ9NR45 359 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 MARCH4Q9P2E8 410 aaPredicted RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 HCSTQ9UBK5 93 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 ACSL6Q9UKU0 697 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 TBX21Q9UL17 535 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 AAR2Q9Y312 384 aaKnown RBP9.19□□□□□ -0.94
CLDN2-202ENST00000540876 NPTNQ9Y639 398 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 SIP14410 1827 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 C5orf42Q9H799 3197 aa9.19□□□□□ -0.94
CLDN2-202ENST00000540876 WNT9AO14904 365 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 GPR182O15218 404 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 PSMD3O43242 534 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 CD3GP09693 182 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 TNFRSF1BP20333 461 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 PTPN6P29350 595 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 HOXA6P31267 233 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SPAM1P38567 509 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 PPT1P50897 306 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 EPHA4P54764 986 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 ERVPABLB-1P60509 514 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SKP2Q13309 424 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 CLINT1Q14677 625 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 DCAF4L1Q3SXM0 396 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 DHRS7BQ6IAN0 325 aaPredicted RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 IL20RBQ6UXL0 311 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 KLBQ86Z14 1044 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 CILP2Q8IUL8 1156 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 TOMM5Q8N4H5 51 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 STAG3L4Q8TBR4 150 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 DPH2Q9BQC3 489 aaPredicted RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 KCNK12Q9HB15 430 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 ZNF638Q14966 1978 aaKnown RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SHROOM3Q8TF72 1996 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 NUP214P35658 2090 aaPredicted RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 REV3LO60673 3130 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 S1PR4O95977 384 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 MT-ND4P03905 459 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 ANXA8P13928 327 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 FEN1P39748 380 aaKnown RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 CDKN2CP42773 168 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 UBE2IP63279 158 aaKnown RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SIM1P81133 766 aaPredicted RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 FABP5Q01469 135 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SPIBQ01892 262 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 DUOXA1Q1HG43 343 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 SGO1Q5FBB7 561 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 IDNKQ5T6J7 187 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 ZNF660Q6AZW8 331 aaPredicted RBP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLDN2-202ENST00000540876 ASPGQ86U10 573 aa9.18□□□□□ -0.94
CLDN2-202ENST00000540876 TSPAN33Q86UF1 283 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms