RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PTBP2Q9UKA9 531 aaKnown RBP4.15□□□□□ -1.75
SNHG1-214ENST00000540865 AMFRQ9UKV5 643 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 PDE10AQ9Y233 779 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 DLGAP4Q9Y2H0 992 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 MED16Q9Y2X0 877 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 DHRS7Q9Y394 339 aa4.15□□□□□ -1.75
SNHG1-214ENST00000540865 DSCAMO60469 2012 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CTAGE15A4D2H0 777 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 OR6C76A6NM76 312 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 AP3B1O00203 1094 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 UBFD1O14562 309 aaKnown RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 ERI3O43414 337 aaKnown RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HCRTR2O43614 444 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 OR10H2O60403 315 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LMX1BO60663 402 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PRKD3O94806 890 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LRATO95237 230 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PLAUP00749 431 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CGAP01215 116 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 IGHV4-39P01824 125 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HIST1H2AGP0C0S8 130 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 DANCRP0C864 163 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HIST1H2ADP20671 130 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SAT1P21673 171 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 TBXA2RP21731 343 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 GSTM2P28161 218 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 NMBRP28336 390 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PTPN6P29350 595 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HPDP32754 393 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CDKN1AP38936 164 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 STT3AP46977 705 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 KCNJ5P48544 419 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 NPY2RP49146 381 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LIM2P55344 173 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 RWDD2BP57060 319 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 UBASH3AP57075 661 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SESN2P58004 480 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 DSCR9P59020 149 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 RPP38P78345 283 aaKnown RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PHC1P78364 1004 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 FUT7Q11130 342 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 BIKQ13323 160 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SP140Q13342 867 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 TOP3AQ13472 1001 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 FGFBP1Q14512 234 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SQLEQ14534 574 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PDCD1Q15116 288 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 RBBP5Q15291 538 aaKnown RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 RPS6KA2Q15349 733 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 NEPROQ6NW34 567 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 VWA1Q6PCB0 445 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PLXDC2Q6UX71 529 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 MBOAT1Q6ZNC8 495 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CENPUQ71F23 418 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LARP4Q71RC2 724 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 P4HA3Q7Z4N8 544 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 KIAA1328Q86T90 577 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 YRDCQ86U90 279 aaKnown RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CTAGE6Q86UF2 777 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 GRAMD2AQ8IUY3 354 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PALM2Q8IXS6 379 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 KLHDC8AQ8IYD2 350 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CPNE9Q8IYJ1 553 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 TAGAPQ8N103 731 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 BCL6BQ8N143 479 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 RFLNBQ8N5W9 214 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CNEP1R1Q8N9A8 125 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 ZNF610Q8N9Z0 462 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 TTLQ8NG68 377 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 OR10H5Q8NGA6 315 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SPPL2AQ8TCT8 520 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CD200R1Q8TD46 325 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 ATL1Q8WXF7 558 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 NEIL2Q969S2 332 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PYCR2Q96C36 320 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CTHRC1Q96CG8 243 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 MS4A6EQ96DS6 147 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 PGM2Q96G03 612 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 TMEM41AQ96HV5 264 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LCORQ96JN0 433 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HIST1H2AHQ96KK5 128 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HS6ST2Q96MM7 605 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SERINC2Q96SA4 455 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CSF3RQ99062 836 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 KRT12Q99456 494 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 GPR21Q99679 349 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 HIST1H2AJQ99878 128 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 AIF1LQ9BQI0 150 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 H2AFJQ9BTM1 129 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 KIFC1Q9BW19 673 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 OPN3Q9H1Y3 402 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 CCDC68Q9H2F9 335 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 SPNS1Q9H2V7 528 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 NHEJ1Q9H9Q4 299 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LYRM4Q9HD34 91 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 LMBRD1Q9NUN5 540 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 BFARQ9NZS9 450 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 DAPP1Q9UN19 280 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 MAD1L1Q9Y6D9 718 aa4.14□□□□□ -1.75
SNHG1-214ENST00000540865 COMMD10Q9Y6G5 202 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms