RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PTTG1O95997 202 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 GKN3PP0CG01 181 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 PCSK2P16519 638 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 PRDX1Q06830 199 aaKnown RBP12.83□□□□□ -0.36
BNIP3-202ENST00000540159 DPTQ07507 201 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 FAM92BQ6ZTR7 304 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 NRMQ8IXM6 262 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 GHDCQ8N2G8 530 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF614Q8N883 585 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 TEX47Q8TBZ9 253 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 IL23AQ9NPF7 189 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ENTPD4Q9Y227 616 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 FABP12A6NFH5 140 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 MAN2B1O00754 1011 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 KAT7O95251 611 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 MSL3P1P0C860 447 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 APEX1P27695 318 aaKnown RBP12.83□□□□□ -0.36
BNIP3-202ENST00000540159 LIMK1P53667 647 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 CD83Q01151 205 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 LARS2Q15031 903 aaKnown RBP12.83□□□□□ -0.36
BNIP3-202ENST00000540159 GPR68Q15743 365 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 C12orf73Q69YU5 71 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ZC3H14Q6PJT7 736 aaKnown RBP12.83□□□□□ -0.36
BNIP3-202ENST00000540159 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 GALNT12Q8IXK2 581 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 OR10G6Q8NH81 332 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 WFIKKN2Q8TEU8 576 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 CREB3L4Q8TEY5 395 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ITPKCQ96DU7 683 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 COX14Q96I36 57 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 ENOPH1Q9UHY7 261 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 CLEC4AQ9UMR7 237 aa12.83□□□□□ -0.36
BNIP3-202ENST00000540159 CASKO14936 926 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 HOXC11O43248 304 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 DYRK3O43781 588 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ASGR2P07307 311 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 HIST1H1TP22492 207 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 RFX2P48378 723 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 PDX1P52945 283 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 AGBL4Q5VU57 503 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 FAM111BQ6SJ93 734 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 PAMR1Q6UXH9 720 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF517Q6ZMY9 492 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 SFTPA2Q8IWL1 248 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 NUP43Q8NFH3 380 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 SLC35B4Q969S0 331 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 MS4A6EQ96DS6 147 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ASB16Q96NS5 453 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 FYTTD1Q96QD9 318 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 MKRN2Q9H000 416 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CRNNQ9UBG3 495 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 APOBEC3BQ9UH17 382 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ZFR2Q9UPR6 939 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3DA0A087WVF3 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3IA0A087WXS9 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3EA0A087X179 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3KA0A087X1G2 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 A0A0A6YYD5 115 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3FA6NER0 549 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3LB9A6J9 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 RAB36O95755 333 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CA3P07451 260 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3HP0C7X1 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 GJA4P35212 333 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 RAB28P51157 221 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 RGS8P57771 180 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 FABP5Q01469 135 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 IFITM2Q01629 132 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CDC20Q12834 499 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CST6Q15828 149 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 DEFB134Q4QY38 66 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TJAP1Q5JTD0 557 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 PDZK1Q5T2W1 519 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3GQ6DHY5 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3CQ6IPX1 549 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 IL20RBQ6UXL0 311 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 LINC00299Q6ZSB3 139 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D3Q8IZP1 549 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 MORN4Q8NDC4 146 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TXNDC15Q96J42 360 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 NUFIP1Q9UHK0 495 aaKnown RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 SLC27A6Q9Y2P4 619 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CLCA3PQ9Y6N3 262 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 COL4A3Q01955 1670 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF670-ZNF695F2Z2N8 137 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 SOCS6O14544 535 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 ZIC2O95409 532 aaPredicted RBP12.82□□□□□ -0.36
BNIP3-202ENST00000540159 RPN2P04844 631 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 CCNYL3P0C7X3 344 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 AHRP35869 848 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 TRIM23P36406 574 aa12.82□□□□□ -0.36
BNIP3-202ENST00000540159 PRMT2P55345 433 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms