RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 JRKLQ9Y4A0 524 aa10.47□□□□□ -0.73
CLSTN3-209ENST00000539982 A8MV72 311 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 FOXE1O00358 373 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 REM1O75628 298 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 DSCR4P56555 118 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 EXOSC7Q15024 291 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 GUSBP1Q15486 140 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 EXOC3L2Q2M3D2 409 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 TEX9Q8N6V9 391 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 GBP7Q8N8V2 638 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 FBXO36Q8NEA4 188 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 ADCY4Q8NFM4 1077 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 AKAP1Q92667 903 aaKnown RBP eCLIP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 TMBIM1Q969X1 311 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 ZBED6CLQ96FA7 236 aaPredicted RBP10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 SLC35A4Q96G79 324 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 PINK1Q9BXM7 581 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 BRINP2Q9C0B6 783 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 ALG9Q9H6U8 611 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 SMYD2Q9NRG4 433 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 PLSCR4Q9NRQ2 329 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 MAT2BQ9NZL9 334 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 PLLPQ9Y342 182 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 ZNF175Q9Y473 711 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 ANGPTL3Q9Y5C1 460 aa10.46□□□□□ -0.73
CLSTN3-209ENST00000539982 CR1P17927 2039 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 SUPT3HB4E1H0 165 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 UBXN8O00124 270 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 UGDHO60701 494 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 SUPT3HO75486 399 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 PIAS1O75925 651 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ATP1B1P05026 303 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 FAM157CP0CG43 387 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 TCEA1P23193 301 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 GRK2P25098 689 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 EMDP50402 254 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 NEK2P51955 445 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 SUCLG1P53597 346 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 OCRLQ01968 901 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 PDIA2Q13087 525 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ZKSCAN8Q15776 578 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 CPSF6Q16630 551 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ADAM5Q6NVV9 412 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 FAM214BQ7L5A3 538 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 OR52R1Q8NGF1 315 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 FNDC9Q8TBE3 224 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 WDR20Q8TBZ3 569 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ATOH8Q96SQ7 321 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ADOQ96SZ5 270 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 SERPINI1Q99574 410 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 GPR22Q99680 433 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 NAPGQ99747 312 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 DDX47Q9H0S4 455 aaKnown RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 PRODH2Q9UF12 536 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 CES1P1Q9UKY3 287 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 GPR55Q9Y2T6 319 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 ZNF337Q9Y3M9 751 aa10.45□□□□□ -0.74
CLSTN3-209ENST00000539982 GOLGA6L10A6NI86 522 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 B4DXG7 233 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 H0YC42 278 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 SEMA3DO95025 777 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 CBX7O95931 251 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 KLK1P06870 262 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 CSNK2A2P19784 350 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 IL11P20809 199 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 ACVR1BP36896 505 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 FEN1P39748 380 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 GAS1P54826 345 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 TPD52P55327 224 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 RAB10P61026 200 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 EFR3AQ14156 821 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 SLMAPQ14BN4 828 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 FASTKD3Q14CZ7 662 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 PON3Q15166 354 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 TRMT12Q53H54 448 aaKnown RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 SLC48A1Q6P1K1 146 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 STAC2Q6ZMT1 411 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 DNM1P46Q6ZS02 220 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 WFDC8Q8IUA0 241 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 OR4K17Q8NGC6 315 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 LILRB1Q8NHL6 650 aaPredicted RBP10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 RNF138Q8WVD3 245 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 RBBP8Q99708 897 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 SLCO5A1Q9H2Y9 848 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 NMRAL1Q9HBL8 299 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 FANCFQ9NPI8 374 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 TXNDC16Q9P2K2 825 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 ADAM29Q9UKF5 820 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 PCDHA9Q9Y5H5 950 aa10.44□□□□□ -0.74
CLSTN3-209ENST00000539982 C1orf226A1L170 272 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 CXorf49A8MYA2 514 aaPredicted RBP10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 E7ESA3 106 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 SEC14L5O43304 696 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 TSPAN2O60636 221 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 KERAO60938 352 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 GUCY1B2O75343 617 aa10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 ERAL1O75616 437 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-209ENST00000539982 ALDOAP04075 364 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms