RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GTPBP3Q969Y2 492 aaKnown RBP20.94■□□□□ 0.94
HOMER3-204ENST00000539827 SDF2Q99470 211 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 DUSP23Q9BVJ7 150 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 YIPF3Q9GZM5 350 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 CXorf21Q9HAI6 301 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 CTPS2Q9NRF8 586 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 AASSQ9UDR5 926 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 GPR55Q9Y2T6 319 aaPredicted RBP20.94■□□□□ 0.94
HOMER3-204ENST00000539827 WDR45Q9Y484 360 aa20.94■□□□□ 0.94
HOMER3-204ENST00000539827 UNC13CQ8NB66 2214 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 CLDN4O14493 209 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 FRS3O43559 492 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 SIGLEC6O43699 453 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 MAOAP21397 527 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 RYKP34925 604 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 OR1D4P47884 311 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 RPP38P78345 283 aaKnown RBP20.93■□□□□ 0.94
HOMER3-204ENST00000539827 MAP4K2Q12851 820 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF155Q12901 538 aaPredicted RBP20.93■□□□□ 0.94
HOMER3-204ENST00000539827 NR0B2Q15466 257 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 NPTX1Q15818 432 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 PERM1Q5SV97 790 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 GALNT12Q8IXK2 581 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 CNIH3Q8TBE1 160 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 GPR151Q8TDV0 419 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 PRR14Q9BWN1 585 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 GAREM1Q9H706 876 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 TMCC3Q9ULS5 477 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 CHST2Q9Y4C5 530 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 RP1P56715 2156 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 ADAMTS9Q9P2N4 1935 aa20.93■□□□□ 0.94
HOMER3-204ENST00000539827 H0YIG0 161 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 ELAVL4P26378 380 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TUBA4AP68366 448 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 SEC23BQ15437 767 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 WDR74Q6RFH5 385 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 PRSS42Q7Z5A4 293 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TSPYL5Q86VY4 417 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 COX18Q8N8Q8 333 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TMEM105Q8N8V8 129 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 AQP11Q8NBQ7 271 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 OR4C6Q8NH72 309 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 HDAC2Q92769 488 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 RIT1Q92963 219 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 RBM18Q96H35 190 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 SLC41A2Q96JW4 573 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 DHRS1Q96LJ7 313 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 GABARAPL3Q9BY60 117 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 FBXO34Q9NWN3 711 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 SEMA5BQ9P283 1151 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 DHCR7Q9UBM7 475 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 SLC13A4Q9UKG4 626 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 ACAD8Q9UKU7 415 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 NDRG4Q9ULP0 352 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 POFUT2Q9Y2G5 429 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 CLDN16Q9Y5I7 305 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 LY6G6EA0A0G2JKS1 128 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 GXYLT2A0PJZ3 443 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 BLACEA4D250 179 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 PATE3B3GLJ2 98 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 HRKO00198 91 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF749O43361 778 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 HYAL3O43820 417 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 GASTP01350 101 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 S1PR1P21453 382 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 CBLP22681 906 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 GABRA3P34903 492 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 IGLV3-21P80748 117 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 CDK5R2Q13319 367 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 GPR68Q15743 365 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 RBM48Q5RL73 367 aaKnown RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 DCST1Q5T197 706 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 DCST2Q5T1A1 773 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TMPRSS9Q7Z410 1059 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 CLIP4Q8N3C7 705 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 SETD9Q8NE22 299 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 RNF31Q96EP0 1072 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 DGAT2Q96PD7 388 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TSC22D3Q99576 134 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 ARHGDIGQ99819 225 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 MTHFD2LQ9H903 347 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF556Q9HAH1 456 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TUBA8Q9NY65 449 aaPredicted RBP20.92■□□□□ 0.94
HOMER3-204ENST00000539827 U3KQA8 63 aa20.92■□□□□ 0.94
HOMER3-204ENST00000539827 TPST2O60704 377 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 IFI6P09912 130 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 EEF1B2P24534 225 aaKnown RBP20.91■□□□□ 0.94
HOMER3-204ENST00000539827 GSSP48637 474 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 HLCSP50747 726 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 MAPK10P53779 464 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 EMP3P54852 163 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 ZCCHC12Q6PEW1 402 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 FIGNL1Q6PIW4 674 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 ZC3H14Q6PJT7 736 aaKnown RBP20.91■□□□□ 0.94
HOMER3-204ENST00000539827 TMIGD2Q96BF3 282 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 PSD2Q9BQI7 771 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 FNDC11Q9BVV2 318 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 NECTIN3Q9NQS3 549 aa20.91■□□□□ 0.94
HOMER3-204ENST00000539827 ZNF443Q9Y2A4 671 aaPredicted RBP20.91■□□□□ 0.94
HOMER3-204ENST00000539827 TRIM64CA6NLI5 447 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms