RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 H7BY64 318 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 GABRPO00591 440 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 LILRB5O75023 590 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 POP7O75817 140 aaKnown RBP19.08■□□□□ 0.65
TMEM260-203ENST00000539559 SLC2A10O95528 541 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 SLC1A3P43003 542 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 PCBP4P57723 403 aaKnown RBP19.08■□□□□ 0.65
TMEM260-203ENST00000539559 SIGIRRQ6IA17 410 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 SLC36A4Q6YBV0 504 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 PARS2Q7L3T8 475 aaKnown RBP19.08■□□□□ 0.65
TMEM260-203ENST00000539559 AMIGO1Q86WK6 493 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 NR2C2APQ86WQ0 139 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 FAM129CQ86XR2 697 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 TEX47Q8TBZ9 253 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 KIAA1143Q96AT1 154 aaPredicted RBP19.08■□□□□ 0.65
TMEM260-203ENST00000539559 TCEAL4Q96EI5 215 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 PRAP1Q96NZ9 151 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 TMEM106CQ9BVX2 250 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 ING3Q9NXR8 418 aa19.08■□□□□ 0.65
TMEM260-203ENST00000539559 TMEM129A0AVI4 362 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 CPSF4LA6NMK7 179 aaKnown RBP19.08■□□□□ 0.64
TMEM260-203ENST00000539559 INMT-MINDY4F8WBC2 141 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 RAB40BQ12829 278 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 TNK1Q13470 666 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 LY6G5CQ5SRR4 150 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 RAET1GQ6H3X3 334 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 C1orf94Q6P1W5 598 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 BMPERQ8N8U9 685 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 IL17RCQ8NAC3 791 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 KREMEN2Q8NCW0 462 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 SLC35G5Q96KT7 338 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 ZDHHC5Q9C0B5 715 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 MAT2BQ9NZL9 334 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 P2RX2Q9UBL9 471 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 GPR55Q9Y2T6 319 aaPredicted RBP19.08■□□□□ 0.64
TMEM260-203ENST00000539559 ELK1P19419 428 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 MMP12P39900 470 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 CDH11P55287 796 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 SMIM11AP58511 58 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 FAM205BPQ63HN1 556 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 SLC27A4Q6P1M0 643 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 PLCZ1Q86YW0 608 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 SLC38A6Q8IZM9 456 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 DUSP18Q8NEJ0 188 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 SPRYD4Q8WW59 207 aaPredicted RBP19.08■□□□□ 0.64
TMEM260-203ENST00000539559 IL36AQ9UHA7 158 aa19.08■□□□□ 0.64
TMEM260-203ENST00000539559 MYO7AQ13402 2215 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 WASH3PC4AMC7 463 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 AKAP8O43823 692 aaKnown RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 GNSP15586 552 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 ZNF155Q12901 538 aaPredicted RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 LASP1Q14847 261 aaKnown RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 IDNKQ5T6J7 187 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 KLBQ86Z14 1044 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FAM20CQ8IXL6 584 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 PCNPQ8WW12 178 aaKnown RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 PHF21AQ96BD5 680 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 GLIPR2Q9H4G4 154 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FGF20Q9NP95 211 aaPredicted RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 ZC3H12DA2A288 527 aaKnown RBP19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FAM183AA6NL82 134 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FAM170BA6NMN3 283 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 CCL16O15467 120 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 HLA-DQB1P01920 261 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 ACADMP11310 421 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 SYN1P17600 705 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FUT5Q11128 374 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 COX10Q12887 443 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 DPPA4Q7L190 304 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 FAM109AQ8N4B1 249 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 ZNF485Q8NCK3 441 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 C16orf58Q96GQ5 468 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 MAP6Q96JE9 813 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 TBX5Q99593 518 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 CSNK1G3Q9Y6M4 447 aa19.07■□□□□ 0.64
TMEM260-203ENST00000539559 ERAL1O75616 437 aaKnown RBP19.06■□□□□ 0.64
TMEM260-203ENST00000539559 C8orf89P0DMQ9 161 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 TFPIP10646 304 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 NUMA1Q14980 2115 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 ZNF805Q5CZA5 627 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 RNASE12Q5GAN4 147 aaKnown RBP19.06■□□□□ 0.64
TMEM260-203ENST00000539559 KRT78Q8N1N4 520 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 ARIH2OSQ8N7S6 290 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 MRGPRX3Q96LB0 322 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 MARVELD1Q9BSK0 173 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 MS4A8Q9BY19 250 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 ISG20L2Q9H9L3 353 aaKnown RBP19.06■□□□□ 0.64
TMEM260-203ENST00000539559 NEUROD4Q9HD90 331 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 EXTL2Q9UBQ6 330 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 PRKAG2Q9UGJ0 569 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 SLC9A8Q9Y2E8 581 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 PCDHGB7Q9Y5F8 929 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 HCFC2Q9Y5Z7 792 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 TRAV6A0A075B6T7 132 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 TRDV1A0A1B0GX56 115 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 FABP7O15540 132 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 UBXN7O94888 489 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 RB1P06400 928 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 FGF9P31371 208 aaPredicted RBP19.06■□□□□ 0.64
TMEM260-203ENST00000539559 GPR4P46093 362 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms