RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 BMPERQ8N8U9 685 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 BEST4Q8NFU0 473 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 SP7Q8TDD2 431 aaPredicted RBP11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC25A46Q96AG3 418 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 TEFMQ96QE5 360 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 TBX5Q99593 518 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 SLA2Q9H6Q3 261 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 A4GALTQ9NPC4 353 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 MBNL1Q9NR56 388 aaKnown RBP11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 SEMA3GQ9NS98 782 aa11.83□□□□□ -0.52
SFSWAP-208ENST00000539506 C4orf51C9J302 202 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ANHXE9PGG2 379 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 POLR1CO15160 346 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 IFNA14P01570 189 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 NAT2P11245 290 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ALAS2P22557 587 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ELAVL4P26378 380 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 FRKP42685 505 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 MAP2K3P46734 347 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TAS2R38P59533 333 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 POU4F3Q15319 338 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SNAPC1Q16533 368 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PIP5KL1Q5T9C9 394 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 DDI2Q5TDH0 399 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 METRNLQ641Q3 311 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 C19orf48Q6RUI8 117 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 MAMSTRQ6ZN01 415 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC37A3Q8NCC5 494 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC7A13Q8TCU3 470 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ZFPM2Q8WW38 1151 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 XAGE5Q8WWM1 108 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 OR5P2Q8WZ92 322 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 UBE2E3Q969T4 207 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 NPAP1Q9NZP6 1156 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 DEC1Q9P2X7 70 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SEC14L4Q9UDX3 406 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF222Q9UK12 451 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 OR1A2Q9Y585 309 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 HYKKA2RU49 373 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 GLOD5A6NK44 160 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PDPK1O15530 556 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 LANCL1O43813 399 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 NOS1APO75052 506 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 EPPINO95925 133 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 FGBP02675 491 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TP53P04637 393 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF250P15622 560 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SRP9P49458 86 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 CDK3Q00526 305 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TEKQ02763 1124 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 CSTF1Q05048 431 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 C1DQ13901 141 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 MLF2Q15773 248 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF791Q3KP31 576 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ADGRD2Q7Z7M1 963 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 LAPTM4BQ86VI4 370 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 NANOGP1Q8N7R0 232 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TMEM145Q8NBT3 493 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 OR4F15Q8NGB8 312 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 C9orf43Q8TAL5 461 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SMAP2Q8WU79 429 aaPredicted RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 KLK6Q92876 244 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 NACC2Q96BF6 587 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 FUZQ9BT04 418 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 C1QTNF6Q9BXI9 259 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PPIL3Q9H2H8 161 aaKnown RBP11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 XKR8Q9H6D3 395 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SYNPO2LQ9H987 977 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ANKRA2Q9H9E1 313 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC25A19Q9HC21 320 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 WASH6PQ9NQA3 447 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PRSS16Q9NQE7 514 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TRAPPC4Q9Y296 219 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 A0A1W2PS29 197 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TEX46H3BTG2 121 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TOXO94900 526 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PAHP00439 452 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 RB1P06400 928 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 CELP19835 753 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 DRD3P35462 400 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 LCN1P1Q5VSP4 162 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 LAMTOR1Q6IAA8 161 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 KIAA1161Q6NSJ0 714 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF793Q6ZN11 406 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 KRT74Q7RTS7 529 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 IQCHQ86VS3 1027 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 RDH10Q8IZV5 341 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 CHFRQ96EP1 664 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 QRFPRQ96P65 431 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 MAPKAP1Q9BPZ7 522 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 PLA2G12AQ9BZM1 189 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 KLHL31Q9H511 634 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 SERGEFQ9UGK8 458 aa11.82□□□□□ -0.52
SFSWAP-208ENST00000539506 HEATR5BQ9P2D3 2071 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
SFSWAP-208ENST00000539506 FABP7O15540 132 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms