RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MRPS18BQ9Y676 258 aaKnown RBP13.15□□□□□ -0.3
CD4-208ENST00000538827 HMGN4O00479 90 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 KLF7O75840 302 aaPredicted RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 PSMG1O95456 288 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 DDAH2O95865 285 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 CLPSP04118 112 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 NR2F1P10589 423 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 S1PR1P21453 382 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 AQP1P29972 269 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 POLE2P56282 527 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 TXNL4AP83876 142 aaKnown RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 CDK6Q00534 326 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 MS4A2Q01362 244 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 DUSP5Q16690 384 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 ZNF630Q2M218 657 aaPredicted RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 GPAT3Q53EU6 434 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 RPS26P11Q5JNZ5 115 aaPredicted RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 ATAD3BQ5T9A4 648 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 GLYATQ6IB77 296 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 SPATA24Q86W54 205 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 CDRT4Q8N9R6 151 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 MORN4Q8NDC4 146 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 C16orf52Q8NHV5 167 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 GPR151Q8TDV0 419 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 ZNF721Q8TF20 911 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 TMEM19Q96HH6 336 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 NSMCE2Q96MF7 247 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 DENND2DQ9H6A0 471 aaPredicted RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 GPN2Q9H9Y4 310 aaPredicted RBP13.14□□□□□ -0.31
CD4-208ENST00000538827 A4GALTQ9NPC4 353 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 EXD2Q9NVH0 621 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 DTX4Q9Y2E6 619 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 HS3ST3B1Q9Y662 390 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 V9GYQ6 96 aa13.14□□□□□ -0.31
CD4-208ENST00000538827 TRBV11-1A0A0K0K1C0 115 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 ASNA1O43681 348 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 AGR2O95994 175 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 LIPCP11150 499 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 BMP2P12643 396 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 F8A1P23610 371 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 MMP11P24347 488 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 GABRA3P34903 492 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 MAGEA8P43361 318 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 RFX3P48380 749 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 EMDP50402 254 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SLC37A1P57057 533 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SLC26A5P58743 744 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 ELF3P78545 371 aaPredicted RBP13.13□□□□□ -0.31
CD4-208ENST00000538827 RBBP4Q09028 425 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 TRAP1Q12931 704 aaKnown RBP13.13□□□□□ -0.31
CD4-208ENST00000538827 CAMK2BQ13554 666 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 PCOLCEQ15113 449 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 TGIF1Q15583 401 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 HLA-DQA1Q5Y7H0 255 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 IGF2-ASQ6U949 168 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 OLIG3Q7RTU3 272 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 GALNT10Q86SR1 603 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
CD4-208ENST00000538827 RAB43Q86YS6 212 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 ZNF615Q8N8J6 731 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 ANKFN1Q8N957 763 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SLC16A11Q8NCK7 471 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 B3GNT7Q8NFL0 401 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 OR1N1Q8NGS0 311 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 MIPOL1Q8TD10 442 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 PIK3R3Q92569 461 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 NKD1Q969G9 470 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 SLC35A4Q96G79 324 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 VMP1Q96GC9 406 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 CRELD1Q96HD1 420 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 WDR77Q9BQA1 342 aaPredicted RBP13.13□□□□□ -0.31
CD4-208ENST00000538827 TMEM38AQ9H6F2 299 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
CD4-208ENST00000538827 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 CFL2Q9Y281 166 aa13.13□□□□□ -0.31
CD4-208ENST00000538827 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 IGHV1-45A0A0A0MS14 117 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 GXYLT2A0PJZ3 443 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 TRABD2BA6NFA1 517 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 DUXAA6NLW8 204 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 ACOT8O14734 319 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 DXOO77932 396 aaKnown RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 COX6A1P12074 109 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 MAN2A2P49641 1150 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 POU6F2P78424 691 aaPredicted RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 FUT5Q11128 374 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 IL10RAQ13651 578 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 CCNIQ14094 377 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 RTP5Q14D33 572 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 ADRM1Q16186 407 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 SYPL1Q16563 259 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 INTS11Q5TA45 600 aaKnown RBP13.12□□□□□ -0.31
CD4-208ENST00000538827 LCN8Q6JVE9 175 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 ZCCHC12Q6PEW1 402 aa13.12□□□□□ -0.31
CD4-208ENST00000538827 PPP1R32Q7Z5V6 425 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms