RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 MSX1P28360 303 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 PTPN6P29350 595 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 SSTR2P30874 369 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 ARRB2P32121 409 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 ETV4P43268 484 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 PPICP45877 212 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 ZFP36L2P47974 494 aaKnown RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 KRTAP10-9P60411 292 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 ZNF155Q12901 538 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 UGT3A2Q3SY77 523 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 DCST1Q5T197 706 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 TMEM81Q6P7N7 255 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 NPSR1Q6W5P4 371 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 NUP54Q7Z3B4 507 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 LIX1LQ8IVB5 337 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 SAMD14Q8IZD0 417 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 OR7G2Q8NG99 324 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 OR1J4Q8NGS1 313 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 OR6Y1Q8NGX8 325 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 OR2T11Q8NH01 316 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 BTBD9Q96Q07 612 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 IQCGQ9H095 443 aaKnown RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 FOLH1BQ9HBA9 442 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 MIEF1Q9NQG6 463 aa13.67□□□□□ -0.22
RAB40B-202ENST00000538809 RRAGDQ9NQL2 400 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 WBP11Q9Y2W2 641 aaKnown RBP13.67□□□□□ -0.22
RAB40B-202ENST00000538809 SNPHO15079 494 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TO15178 435 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 PLOD3O60568 738 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 ICOSLGO75144 302 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 ERN1O75460 977 aaKnown RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 REM1O75628 298 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 BCAS2O75934 225 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 HPNP05981 417 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 FGF4P08620 206 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 IGFBP2P18065 325 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 DRD5P21918 477 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TACR1P25103 407 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 NCBP2P52298 156 aaKnown RBP eCLIP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 DCAF7P61962 342 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TLE4Q04727 773 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 ZNF844Q08AG5 666 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 ACSF3Q4G176 576 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TIGD3Q6B0B8 471 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 NOXRED1Q6NXP6 359 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 SEM1Q6ZVN7 128 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 IKBIPQ70UQ0 350 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 WDR53Q7Z5U6 358 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 YRDCQ86U90 279 aaKnown RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 FAM83FQ8NEG4 500 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 VSTM2LQ96N03 204 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TREX2Q9BQ50 279 aaPredicted RBP13.66□□□□□ -0.22
RAB40B-202ENST00000538809 SERHLQ9NQF3 203 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 CAMK2AQ9UQM7 478 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 DNAJC15Q9Y5T4 150 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 MPDZO75970 2070 aa13.66□□□□□ -0.22
RAB40B-202ENST00000538809 TMEM233B4DJY2 109 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 SLC28A1O00337 649 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 CT45A8P0DMV1 189 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 CT45A9P0DMV2 189 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 ELAVL4P26378 380 aaKnown RBP13.65□□□□□ -0.22
RAB40B-202ENST00000538809 MC3RP41968 323 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 CT45A2Q5DJT8 189 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 TNFAIP8L3Q5GJ75 292 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 ARL13AQ5H913 290 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-202ENST00000538809 RIPPLY2Q5TAB7 128 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 SLC30A6Q6NXT4 461 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 TMEM107Q6UX40 140 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 ZCCHC23Q6ZST2 131 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-202ENST00000538809 OR4N2Q8NGD1 307 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 C14orf79Q96F83 325 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 ZNF764Q96H86 408 aaPredicted RBP13.65□□□□□ -0.22
RAB40B-202ENST00000538809 EGLN2Q96KS0 407 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 COL21A1Q96P44 957 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 ADOQ96SZ5 270 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 TIMP4Q99727 224 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 UGT2B28Q9BY64 529 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 LRTM1Q9HBL6 345 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 C1orf109Q9NX04 203 aa13.65□□□□□ -0.22
RAB40B-202ENST00000538809 OTOGQ6ZRI0 2925 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 AKAP9Q99996 3911 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 A0A087WV62 115 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 OR6C70A6NIJ9 312 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 LSM1O15116 133 aaKnown RBP13.64□□□□□ -0.23
RAB40B-202ENST00000538809 TSPAN2O60636 221 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 SEC22BO75396 215 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 PSMG1O95456 288 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 BPGMP07738 259 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 HOXD4P09016 255 aaPredicted RBP13.64□□□□□ -0.23
RAB40B-202ENST00000538809 NEFHP12036 1026 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 BMP7P18075 431 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 IL12BP29460 328 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 NTSP30990 170 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 MPIP34949 423 aa13.64□□□□□ -0.23
RAB40B-202ENST00000538809 SH2D4BQ5SQS7 431 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms