RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 ZNF582Q96NG8 517 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-204ENST00000538492 LYARQ9NX58 379 aaKnown RBP23.35■■□□□ 1.33
RAB40C-204ENST00000538492 PEX16Q9Y5Y5 336 aa23.35■■□□□ 1.33
RAB40C-204ENST00000538492 FAM170BA6NMN3 283 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 CTDSP2O14595 271 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 DNAJB6O75190 326 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 TRHRP34981 398 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-204ENST00000538492 RPS15AP62244 130 aaKnown RBP23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ZNF45Q02386 682 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 PRKCDQ05655 676 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 RGS1Q08116 209 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 CEBPEQ15744 281 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 DEFB134Q4QY38 66 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ATAD3BQ5T9A4 648 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 LIPKQ5VXJ0 399 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 OR52I1Q8NGK6 324 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 SLC35A4Q96G79 324 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 CARD8Q9Y2G2 431 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ARHGEF17Q96PE2 2063 aaPredicted RBP23.34■■□□□ 1.33
RAB40C-204ENST00000538492 SAGE2PA6NJ88 616 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ALOX12P18054 663 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 SMSP52788 366 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 CLEC12AQ5QGZ9 265 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 FBXO42Q6P3S6 717 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ZNF730Q6ZMV8 503 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 POC5Q8NA72 575 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ADAMTS15Q8TE58 950 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 DOK4Q8TEW6 326 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 FAM46AQ96IP4 442 aaKnown RBP23.34■■□□□ 1.33
RAB40C-204ENST00000538492 C10orf90Q96M02 699 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ASPNQ9BXN1 380 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 ACTRT3Q9BYD9 372 aa23.34■■□□□ 1.33
RAB40C-204ENST00000538492 RASGRP1O95267 797 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 RPS19P39019 145 aaKnown RBP23.33■■□□□ 1.33
RAB40C-204ENST00000538492 ZNF181Q2M3W8 571 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 OR10G6Q8NH81 332 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 SLC9A6Q92581 669 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 LMAN2LQ9H0V9 348 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 GIN1Q9NXP7 522 aa23.33■■□□□ 1.33
RAB40C-204ENST00000538492 P2RX6O15547 441 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 MED26O95402 600 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 SLC35G6P0C7Q6 338 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 CPN2P22792 545 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 PSMA1P25786 263 aaKnown RBP23.33■■□□□ 1.32
RAB40C-204ENST00000538492 ETV5P41161 510 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 ETV1P50549 477 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 SIM1P81133 766 aaPredicted RBP23.33■■□□□ 1.32
RAB40C-204ENST00000538492 PRRT3Q5FWE3 981 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 PRAMEF8Q5VWM4 474 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 PRAMEF7Q5VXH5 474 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 PROKR2Q8NFJ6 384 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 OR8D4Q8NGM9 314 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 TEX47Q8TBZ9 253 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 CDS1Q92903 461 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 ARHGDIGQ99819 225 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 SAP130Q9H0E3 1048 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 TMEM74BQ9NUR3 256 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 LIPT1Q9Y234 373 aa23.33■■□□□ 1.32
RAB40C-204ENST00000538492 CTSVO60911 334 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 CCNYL3P0C7X3 344 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 PTNP21246 168 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 GSTM3P21266 225 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 ACSL1P33121 698 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 C1DQ13901 141 aaKnown RBP23.32■■□□□ 1.32
RAB40C-204ENST00000538492 NFATC4Q14934 902 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 AGAP7PQ5VUJ5 663 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 USP30Q70CQ3 517 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 DIO2Q92813 273 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 RERGLQ9H628 205 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 SYT5O00445 386 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 ASNA1O43681 348 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 CRYBB2P43320 205 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 TFF2Q03403 129 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 RRM2BQ7LG56 351 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 SHISA5Q8N114 240 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 LRRC25Q8N386 305 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-204ENST00000538492 OR52P1PQ8NH57 321 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 BMFQ96LC9 184 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 WDR92Q96MX6 357 aa23.32■■□□□ 1.32
RAB40C-204ENST00000538492 CHCHD3Q9NX63 227 aaKnown RBP23.32■■□□□ 1.32
RAB40C-204ENST00000538492 PNMA8CA0A1B0GUJ8 204 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 ZSCAN9O15535 394 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-204ENST00000538492 RAB36O95755 333 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 NDUFS1P28331 727 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 KIAA1024LP59773 190 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 EFNB1P98172 346 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 TNFRSF17Q02223 184 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 TRAM2Q15035 370 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 SPANXN2Q5MJ10 180 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 SLC27A4Q6P1M0 643 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 EGFL6Q8IUX8 553 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 NKAIN4Q8IVV8 208 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 DIMT1Q9UNQ2 313 aaKnown RBP23.31■■□□□ 1.32
RAB40C-204ENST00000538492 FANCMQ8IYD8 2048 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 ISPDA4D126 451 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 GSAPA4D1B5 854 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 POLR2CP19387 275 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-204ENST00000538492 RGS8P57771 180 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-204ENST00000538492 ID2Q02363 134 aa23.31■■□□□ 1.32
RAB40C-204ENST00000538492 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms