RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 XKR8Q9H6D3 395 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 FGF20Q9NP95 211 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 OTOL1A6NHN0 477 aaPredicted RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 SOCS6O14544 535 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 TRAPPC2P0DI81 140 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 TRAPPC2BP0DI82 140 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 IFI30P13284 250 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 C6P13671 934 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 ELK1P19419 428 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 POU3F3P20264 500 aaPredicted RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 ITGB8P26012 769 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 SLC1A3P43003 542 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 GPR1P46091 355 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 GZMKP49863 264 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 QPRTQ15274 297 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 CEP78Q5JTW2 689 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 TRIM69Q86WT6 500 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 SUN3Q8TAQ9 357 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 DEDD2Q8WXF8 326 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 KCNJ15Q99712 375 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 ZCCHC3Q9NUD5 404 aaKnown RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 SLC23A1Q9UHI7 598 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 CSNK1G3Q9Y6M4 447 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 MDC1Q14676 2089 aaKnown RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 GSAPA4D1B5 854 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 GABRPO00591 440 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 HMGN2P05204 90 aaKnown RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 SYPP08247 313 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 ACP5P13686 325 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 CPN2P22792 545 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 UBE3AQ05086 875 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 NDUFAF5Q5TEU4 345 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 CCDC116Q8IYX3 515 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 MED18Q9BUE0 208 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 RHBGQ9H310 441 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 MED20Q9H944 212 aa13.23□□□□□ -0.29
CLPB-209ENST00000538039 RBFOX1Q9NWB1 397 aaKnown RBP13.23□□□□□ -0.29
CLPB-209ENST00000538039 TMEM129A0AVI4 362 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 QSOX1O00391 747 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 PRODHO43272 600 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 LYRM1O43325 122 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 OR1F1O43749 312 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 FCMRO60667 390 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 HLA-DMAP28067 261 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 GABRA5P31644 462 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 GPR4P46093 362 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 MARCH9Q86YJ5 346 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 SIRT6Q8N6T7 355 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 DNAJC5GQ8N7S2 189 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 KREMEN2Q8NCW0 462 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 DOK4Q8TEW6 326 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 SPRYD4Q8WW59 207 aaPredicted RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 MS4A3Q96HJ5 214 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 ZNF607Q96SK3 696 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 TMEM43Q9BTV4 400 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 TRMT61BQ9BVS5 477 aaKnown RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 MRPS18AQ9NVS2 196 aaKnown RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 CENPVL1A0A0U1RR11 272 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 PI15O43692 258 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 ERAL1O75616 437 aaKnown RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 MYL12AP19105 171 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 BTBD16Q32M84 506 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 LCN1P1Q5VSP4 162 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 CACUL1Q86Y37 369 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 TCTE3Q8IZS6 198 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 OR2L2Q8NH16 312 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 CNRIP1Q96F85 164 aaPredicted RBP13.22□□□□□ -0.29
CLPB-209ENST00000538039 SLC35G5Q96KT7 338 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 QRFPRQ96P65 431 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 HCAR1Q9BXC0 346 aa13.22□□□□□ -0.29
CLPB-209ENST00000538039 SLC30A4O14863 429 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 UBXN7O94888 489 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 RB1P06400 928 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 CISD3P0C7P0 127 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 NR2F6P10588 404 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 OMPP47874 163 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 NCBP2P52298 156 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLPB-209ENST00000538039 P2RX3P56373 397 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
CLPB-209ENST00000538039 RAB40BQ12829 278 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 C18orf63Q68DL7 685 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 ASB18Q6ZVZ8 466 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 DUSP18Q8NEJ0 188 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 HSD17B8Q92506 261 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 NUS1Q96E22 293 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 ATG4BQ9Y4P1 393 aa13.21□□□□□ -0.29
CLPB-209ENST00000538039 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.21□□□□□ -0.29
CLPB-209ENST00000538039 SCAMP1O15126 338 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms