RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 POU2F3Q9UKI9 436 aa3.47□□□□□ -1.85
YBX3-205ENST00000536107 SH2B3Q9UQQ2 575 aa3.47□□□□□ -1.85
YBX3-205ENST00000536107 SNX8Q9Y5X2 465 aa3.47□□□□□ -1.85
YBX3-205ENST00000536107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.47□□□□□ -1.85
YBX3-205ENST00000536107 COL7A1Q02388 2944 aa3.47□□□□□ -1.85
YBX3-205ENST00000536107 KIAA1549Q9HCM3 1950 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 LOC105371242A0A075B767 164 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 NPIPA5A0A0B4J1W7 369 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 LOC390937A0A1W2PQ73 354 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 NPIPA7E9PJI5 369 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 PSMD12O00232 456 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 LIN7AO14910 233 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 P2RX6O15547 441 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SGTAO43765 313 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 SRP72O76094 671 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 LRATO95237 230 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 CRHP06850 196 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 PRSS56P0CW18 603 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 NPIPA8P0DM63 369 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ZFXP17010 805 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 MAOAP21397 527 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 IL10P22301 178 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 PRTN3P24158 256 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 CHMP24386 653 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 PSMA2P25787 234 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ACADLP28330 430 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 IL2RGP31785 369 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 TTKP33981 857 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ME1P48163 572 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MASP1P48740 699 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 HCAR3P49019 387 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 CDK9P50750 372 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 FABP6P51161 128 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ZNF135P52742 658 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 CDH15P55291 814 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 BSPH1Q075Z2 132 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ZNF844Q08AG5 666 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 BAMBIQ13145 260 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MAMLD1Q13495 774 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 TAF9Q16594 264 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 EIPR1Q53HC9 387 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 CCDC122Q5T0U0 273 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 NCMAPQ5T1S8 102 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 TRIM65Q6PJ69 517 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SYT10Q6XYQ8 523 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 HSDL2Q6YN16 418 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ZNF551Q7Z340 670 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 GLT6D1Q7Z4J2 308 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 YRDCQ86U90 279 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 LRRC49Q8IUZ0 686 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ZNF619Q8N2I2 560 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MUC15Q8N387 334 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SLC25A41Q8N5S1 370 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SIGLECL1Q8N7X8 197 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 APCDD1LQ8NCL9 501 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 LINC00301Q8NCQ3 95 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 CCNYQ8ND76 341 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 NFAM1Q8NET5 270 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 PPHLN1Q8NEY8 458 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 DTX3LQ8TDB6 740 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SLC25A28Q96A46 364 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 TBC1D20Q96BZ9 403 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ULK4Q96C45 1275 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 RHBDF1Q96CC6 855 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MRFAP1L1Q96HT8 127 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MCEEQ96PE7 176 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 OR1F2PQ96R84 312 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MACROD1Q9BQ69 325 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SNRNP25Q9BV90 132 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 BPESC1Q9GZL8 116 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 RHBGQ9H310 441 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 TRABDQ9H4I3 376 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 BEX1Q9HBH7 125 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MRPS30Q9NP92 439 aaKnown RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 ACSS1Q9NUB1 689 aaPredicted RBP3.46□□□□□ -1.86
YBX3-205ENST00000536107 ABCF3Q9NUQ8 709 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 ADAM22Q9P0K1 906 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 AMACRQ9UHK6 382 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 RSPH14Q9UHP6 348 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 SCOCQ9UIL1 159 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MID2Q9UJV3 735 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MOKQ9UQ07 419 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.46□□□□□ -1.86
YBX3-205ENST00000536107 SCN2AQ99250 2005 aa3.46□□□□□ -1.86
YBX3-205ENST00000536107 MALRD1Q5VYJ5 2156 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 TCRBV7S2A1N4TA0A589 114 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 OR2A25A4D2G3 310 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 SLC22A20A6NK97 555 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 SIGLEC16A6NMB1 481 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PRSS47A8MTI9 375 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 B4DSR2 109 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 H7C417 338 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 PIP5K1CO60331 668 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 RAMP1O60894 148 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 GFPT2O94808 682 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 NDST3O95803 873 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 ACTL6AO96019 429 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 C1QAP02745 245 aa3.45□□□□□ -1.86
YBX3-205ENST00000536107 HPNP05981 417 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms