RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ANKRD33BA6NCL7 494 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 OR6C70A6NIJ9 312 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 RNASET2O00584 256 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 TSPAN2O60636 221 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 SCN2BO60939 215 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 KIR3DL1P43629 444 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 KCNK10P57789 538 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 GAB1Q13480 694 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 EIF2S3LQ2VIR3 472 aaKnown RBP20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 HSP90B2PQ58FF3 399 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 SPANXN4Q5MJ08 99 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 BICRALQ6AI39 1079 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 DIO2Q92813 273 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 SLC35A4Q96G79 324 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 MARK4Q96L34 752 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 MS4A4EQ96PG1 132 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 NODALQ96S42 347 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 TTTY12Q9BZ98 90 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 IL1RL2Q9HB29 575 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 NEUROD4Q9HD90 331 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 SEC14L3Q9UDX4 400 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 OR10H1Q9Y4A9 318 aa20.86■□□□□ 0.93
SFSWAP-204ENST00000535399 TTC36A6NLP5 189 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 E9PBE3 544 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 HS6ST1O60243 411 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 REM1O75628 298 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 IDO1P14902 403 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 CASP3P42574 277 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 PPIAP62937 165 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 HBA1P69905 142 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 RPP38P78345 283 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 PLGLB1Q02325 96 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 ZNHIT3Q15649 155 aaPredicted RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 GSTA3Q16772 222 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 DPY19L1Q2PZI1 675 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 CYP27C1Q4G0S4 372 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 PDCD4Q53EL6 469 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 KRTCAP3Q53RY4 240 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 TBCELQ5QJ74 424 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 MFSD12Q6NUT3 480 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 GFRALQ6UXV0 394 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 SZRD1Q7Z422 152 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 CLECL1Q8IZS7 167 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 COL21A1Q96P44 957 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 EBF4Q9BQW3 602 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 ANGPTL4Q9BY76 406 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 ZCCHC3Q9NUD5 404 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 SNX8Q9Y5X2 465 aa20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.85■□□□□ 0.93
SFSWAP-204ENST00000535399 LRRC3CA6NJW4 275 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 FAM166BA8MTA8 275 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 C9JVG2 144 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 TFECO14948 347 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 UBDO15205 165 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ASNA1O43681 348 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 EDF1O60869 148 aaKnown RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 TRIM3O75382 744 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 UNC5CO95185 931 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 GABRA3P34903 492 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 CCT3P49368 545 aaKnown RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 AQP5P55064 265 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 KCNJ2P63252 427 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 PRR5P85299 388 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ELOAQ14241 798 aaKnown RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 HYAL4Q2M3T9 481 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 FAM174BQ3ZCQ3 159 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 CMPK2Q5EBM0 449 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 EXOSC6Q5RKV6 272 aaKnown RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ANXA8L1Q5VT79 327 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 TMEM81Q6P7N7 255 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ACAD11Q709F0 780 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ARFGAP2Q8N6H7 521 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 CDRT4Q8N9R6 151 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 C16orf58Q96GQ5 468 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ADOQ96SZ5 270 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 DOHHQ9BU89 302 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 CCDC28BQ9BUN5 200 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 Q9N2J8 555 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 SDR39U1Q9NRG7 319 aaPredicted RBP20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 CBLCQ9ULV8 474 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 ESPL1Q14674 2120 aa20.84■□□□□ 0.93
SFSWAP-204ENST00000535399 FLNCQ14315 2725 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 PRSS51A0A1B0GVH4 220 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 GXYLT2A0PJZ3 443 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 CFLARO15519 480 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 ABCB7O75027 752 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 NKX2-2O95096 273 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 ACP2P11117 423 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 S100A3P33764 101 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 PTGDSP41222 190 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 ZCCHC12Q6PEW1 402 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 BNC2Q6ZN30 1099 aaPredicted RBP20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 SLC22A16Q86VW1 577 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 TMEM251Q8N6I4 163 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 OR52N2Q8NGI0 321 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 SFXN5Q8TD22 340 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 RNF138Q8WVD3 245 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 RILPQ96NA2 401 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 METTL7AQ9H8H3 244 aa20.83■□□□□ 0.93
SFSWAP-204ENST00000535399 ZDHHC11Q9H8X9 412 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms