RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ANKS6Q68DC2 871 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C11orf88Q6PI97 169 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ATRAIDQ6UW56 229 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C5orf46Q6UWT4 87 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 CHRDL2Q6WN34 429 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 CDH26Q8IXH8 852 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C9orf62Q8N4C0 152 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ASB11Q8WXH4 323 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 FBXO17Q96EF6 278 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DTD2Q96FN9 168 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PDLIM5Q96HC4 596 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OR5M11Q96RB7 305 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PELOQ9BRX2 385 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 THAP10Q9P2Z0 257 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 DUX4Q9UBX2 424 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PLAGL1Q9UM63 463 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 SYNDIG1LA6NDD5 238 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 H0Y8X5 98 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 FXYD1O00168 92 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 STX16O14662 325 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 SMAD9O15198 467 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 SH3BGRLO75368 114 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RASGRP1O95267 797 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ETHE1O95571 254 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 FGF4P08620 206 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 TRAPPC2P0DI81 140 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 TRAPPC2BP0DI82 140 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ITPKAP23677 461 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 HRH2P25021 359 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 EEFSECP57772 596 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 PFN3P60673 137 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 LCP2Q13094 533 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ETFDHQ16134 617 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 HKDC1Q2TB90 917 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 VASNQ6EMK4 673 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C8orf82Q6P1X6 216 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 C3P1Q6ZMU1 363 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RTL10Q7L3V2 364 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 TMEM179BQ7Z7N9 219 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OR8D4Q8NGM9 314 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 RNASE11Q8TAA1 199 aaKnown RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 BTN2A2Q8WVV5 523 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 IPCEF1Q8WWN9 437 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-216ENST00000534765 GDE1Q9NZC3 331 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 OARD1Q9Y530 152 aa8.53□□□□□ -1.04
SF3B2-216ENST00000534765 A0A0A6YYJ9 748 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 SPDEFO95238 335 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 SRPRAP08240 638 aaKnown RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 CSF3P09919 207 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 RHCEP18577 417 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 AKT1P31749 480 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 RPS19P39019 145 aaKnown RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 NSG1P42857 185 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 TMEM115Q12893 351 aaPredicted RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 GTF2H2Q13888 395 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 MAD2L1BPQ15013 274 aaPredicted RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 NCF4Q15080 339 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 LTB4RQ15722 352 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 MAPKAPK3Q16644 382 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 EXOC3L2Q2M3D2 409 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 GTF2H2CQ6P1K8 395 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 NKAPQ8N5F7 415 aaKnown RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 WDSUB1Q8N9V3 476 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 AP2M1Q96CW1 435 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 OR2AG1Q9H205 316 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 ABCG5Q9H222 651 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 IPPKQ9H8X2 491 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 UNKLQ9H9P5 680 aaKnown RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 UFSP2Q9NUQ7 469 aa8.52□□□□□ -1.04
SF3B2-216ENST00000534765 POLR3HQ9Y535 204 aaPredicted RBP8.52□□□□□ -1.04
SF3B2-216ENST00000534765 C2CD4DB7Z1M9 353 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 WNT9AO14904 365 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 ANKRD28O15084 1053 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 HEXBP07686 556 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 HOXA1P49639 335 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-216ENST00000534765 SP140Q13342 867 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 C1DQ13901 141 aaKnown RBP8.52□□□□□ -1.05
SF3B2-216ENST00000534765 PTGR1Q14914 329 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 CRTC2Q53ET0 693 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-216ENST00000534765 PRAMEF13Q5VWM6 474 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 MTFR2Q6P444 385 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 SUSD1Q6UWL2 747 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 TMEM92Q6UXU6 159 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 SLC46A3Q7Z3Q1 461 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 PAQR7Q86WK9 346 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 ADGRG3Q86Y34 549 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 TDHQ8IZJ6 230 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 STPG2Q8N412 459 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 IL17RCQ8NAC3 791 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 SMRP1Q8NCR6 262 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 AKR7LQ8NHP1 331 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 PMM1Q92871 262 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 GTPBP3Q969Y2 492 aaKnown RBP8.52□□□□□ -1.05
SF3B2-216ENST00000534765 ZFP3Q96NJ6 502 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 MNTQ99583 582 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 GINS4Q9BRT9 223 aa8.52□□□□□ -1.05
SF3B2-216ENST00000534765 MTIF3Q9H2K0 278 aaKnown RBP8.52□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF275Q9NSD4 429 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms