RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 PM20D2Q8IYS1 436 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 OR5M9Q8NGP3 310 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 OR1J4Q8NGS1 313 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 TMBIM1Q969X1 311 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 MTERF3Q96E29 417 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 AMDHD1Q96NU7 426 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 GNRHR2Q96P88 292 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 NODALQ96S42 347 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 OSBPL11Q9BXB4 747 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 SLC6A15Q9H2J7 730 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 FOLH1BQ9HBA9 442 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 HCFC1P51610 2035 aa20.36■□□□□ 0.85
BEST1-207ENST00000533521 LSM1O15116 133 aaKnown RBP20.35■□□□□ 0.85
BEST1-207ENST00000533521 CBR3O75828 277 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 LRATO95237 230 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 GLI4P10075 376 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 KRT20P35900 424 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 ETV4P43268 484 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 ASMTP46597 345 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 NCBP2P52298 156 aaKnown RBP eCLIP20.35■□□□□ 0.85
BEST1-207ENST00000533521 CRYZQ08257 329 aaKnown RBP20.35■□□□□ 0.85
BEST1-207ENST00000533521 PRSS53Q2L4Q9 553 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 CYP27C1Q4G0S4 372 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 C1orf185Q5T7R7 199 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 GDF7Q7Z4P5 450 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 MCEMP1Q8IX19 187 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 OR2T11Q8NH01 316 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 ELP4Q96EB1 424 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 PARD6BQ9BYG5 372 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 GLIPR2Q9H4G4 154 aa20.35■□□□□ 0.85
BEST1-207ENST00000533521 SSU72Q9NP77 194 aaKnown RBP20.35■□□□□ 0.85
BEST1-207ENST00000533521 MRPS18CQ9Y3D5 142 aaKnown RBP20.35■□□□□ 0.85
BEST1-207ENST00000533521 CREBBPQ92793 2442 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 PRAMEF25A6NGN4 478 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 REM1O75628 298 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 JUNP05412 331 aaKnown RBP20.34■□□□□ 0.85
BEST1-207ENST00000533521 BPGMP07738 259 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 DDX5P17844 614 aaKnown RBP20.34■□□□□ 0.85
BEST1-207ENST00000533521 IGFBP2P18065 325 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 TACR1P25103 407 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 FRKP42685 505 aaPredicted RBP20.34■□□□□ 0.85
BEST1-207ENST00000533521 KIR3DL1P43629 444 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 PSG6Q00889 435 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 PDE7AQ13946 482 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 RFTN2Q52LD8 501 aaPredicted RBP20.34■□□□□ 0.85
BEST1-207ENST00000533521 RIPPLY2Q5TAB7 128 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 VASNQ6EMK4 673 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 ULK2Q8IYT8 1036 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 RPRMLQ8N4K4 120 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 CDC26Q8NHZ8 85 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 HOXB13Q92826 284 aaPredicted RBP20.34■□□□□ 0.85
BEST1-207ENST00000533521 EGLN2Q96KS0 407 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 PRDM14Q9GZV8 571 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 REEP4Q9H6H4 257 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 ANKRA2Q9H9E1 313 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 KCNJ16Q9NPI9 418 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 NTMQ9P121 344 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 DCHS2Q6V1P9 2916 aa20.34■□□□□ 0.85
BEST1-207ENST00000533521 UPK1AO00322 258 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 SPAG7O75391 227 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 TRAPPC6AO75865 159 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 ACTL6AO96019 429 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 CHRNGP07510 517 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 LINC00032P0C843 101 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 PRF1P14222 555 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 SDC1P18827 310 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 CORO7P57737 925 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 ANGPTL8Q6UXH0 198 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 NPSR1Q6W5P4 371 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 CROCCP2Q86T23 111 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 TWIST2Q8WVJ9 160 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 PPP3R2Q96LZ3 170 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 TIMP4Q99727 224 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 MECRQ9BV79 373 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 ACSS1Q9NUB1 689 aaPredicted RBP20.33■□□□□ 0.85
BEST1-207ENST00000533521 KLRF1Q9NZS2 232 aa20.33■□□□□ 0.85
BEST1-207ENST00000533521 C19orf84I3L1E1 186 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 TOXO94900 526 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 SNUPNO95149 360 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 EPPINO95925 133 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 IL12BP29460 328 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 RPL3P39023 403 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 MC3RP41968 323 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 ZFP36L2P47974 494 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 TFF3Q07654 80 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 XKR7Q5GH72 579 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 LRIG3Q6UXM1 1119 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 LARP4Q71RC2 724 aaKnown RBP eCLIP20.32■□□□□ 0.84
BEST1-207ENST00000533521 R3HCC1LQ7Z5L2 792 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 SLC44A2Q8IWA5 706 aaPredicted RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 ZFP28Q8NHY6 868 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 C14orf79Q96F83 325 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 ZBED6CLQ96FA7 236 aaPredicted RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 ZIM3Q96PE6 472 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 ADOQ96SZ5 270 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 LMF2Q9BU23 707 aaKnown RBP20.32■□□□□ 0.84
BEST1-207ENST00000533521 TRIM8Q9BZR9 551 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 OR2B2Q9GZK3 357 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 SLC24A3Q9HC58 644 aa20.32■□□□□ 0.84
BEST1-207ENST00000533521 DDX18Q9NVP1 670 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms