RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SRFBP1Q8NEF9 429 aaKnown RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR2L5Q8NG80 312 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR52N2Q8NGI0 321 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 C16orf78Q8WTQ4 265 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC7A6OSQ96CW6 309 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 SMIM10Q96HG1 83 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 TBCDQ9BTW9 1192 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF717Q9BY31 904 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 DEFB127Q9H1M4 99 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 DDX31Q9H8H2 851 aaKnown RBP10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC52A3Q9NQ40 469 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 PRDM7Q9NQW5 492 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 MCM8Q9UJA3 840 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 HIVEP2P31629 2446 aa10.44□□□□□ -0.74
TRAPPC4-213ENST00000533149 ANKRD65E5RJM6 399 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 FBP2O00757 339 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 AIM2O14862 343 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 SMAD7O15105 426 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 HNRNPCL1O60812 293 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 WDR1O75083 606 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 CRLF1O75462 422 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 LRATO95237 230 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 B3GALT4O96024 378 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC35G6P0C7Q6 338 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF888P0CJ79 500 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 PRPS1L1P21108 318 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 JAK1P23458 1154 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 XCR1P46094 333 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 ASMTP46597 345 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 RASSF2P50749 326 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 ARFIP1P53367 373 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 CLNS1AP54105 237 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 MLF1P58340 268 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLC26A5P58743 744 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 RAB8AP61006 207 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 BTN3A2P78410 334 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 C2orf80Q0P641 193 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 NSDHLQ15738 373 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 PHC2Q8IXK0 858 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 RIMKLAQ8IXN7 391 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 LRRC75A-AS1Q8N1F1 130 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 GLB1L3Q8NCI6 653 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR5M9Q8NGP3 310 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR51Q1Q8NH59 317 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 CDC26Q8NHZ8 85 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 FBXO27Q8NI29 283 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.43□□□□□ -0.741e-323■■■■■ 60.7
TRAPPC4-213ENST00000533149 ELP5Q8TE02 316 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 UTP15Q8TED0 518 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 TSPEARQ8WU66 669 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 TMEM158Q8WZ71 300 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 GFM2Q969S9 779 aaKnown RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 GAL3ST3Q96A11 431 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 TM4SF18Q96CE8 201 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 RCN3Q96D15 328 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 SPDL1Q96EA4 605 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 EFCAB1Q9HAE3 211 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 TAS2R1Q9NYW7 299 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 FOXD3Q9UJU5 478 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 ADAM29Q9UKF5 820 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM215AQ9Y5M1 114 aa10.43□□□□□ -0.74
TRAPPC4-213ENST00000533149 A0A1W2PP18 115 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 URADA6NGE7 173 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 TUBAL3A6NHL2 446 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 CCDC154A6NI56 674 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 C4orf51C9J302 202 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ACOT7O00154 380 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 CFLARO15519 480 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 TMPRSS11DO60235 418 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 NSA2O95478 260 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 EPXP11678 715 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 HIST1H1TP22492 207 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ATP5A1P25705 553 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ADH7P40394 386 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 SSR2P43308 183 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 MAPK12P53778 367 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 SNRPNP63162 240 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 MXRA7P84157 204 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF763Q0D2J5 394 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 SLAMF1Q13291 335 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 PGS1Q32NB8 556 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 MMEL1Q495T6 779 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 RTL6Q6ICC9 239 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 FAM71E1Q6IPT2 247 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 TRIM40Q6P9F5 258 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 PRSS57Q6UWY2 283 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZNF793Q6ZN11 406 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 CXorf67Q86X51 503 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 NUDT13Q86X67 352 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 PLPP5Q8NEB5 264 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 OR9A4Q8NGU2 314 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ZCCHC10Q8TBK6 192 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 RNASE6Q93091 150 aaKnown RBP10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 VPS33AQ96AX1 596 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 Q96MF0 132 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 KCNC2Q96PR1 638 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 BTBD10Q9BSF8 475 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 MYNNQ9NPC7 610 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 ATP6V1HQ9UI12 483 aa10.42□□□□□ -0.74
TRAPPC4-213ENST00000533149 WBP11Q9Y2W2 641 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms