RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 KLHL30Q0D2K2 578 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 CDC20Q12834 499 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PIGHQ14442 188 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 KIR2DS5Q14953 304 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 BOLA3Q53S33 107 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 LCE1EQ5T753 118 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TMEM198Q66K66 360 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 ACSM2BQ68CK6 577 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 KRTAP5-11Q6L8G4 156 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 WDR74Q6RFH5 385 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 RFLNAQ6ZTI6 216 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 HIST3H2AQ7L7L0 130 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 ZNF571Q7Z3V5 609 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 BMPERQ8N8U9 685 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 EXD1Q8NHP7 514 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 C9orf43Q8TAL5 461 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 GSDMBQ8TAX9 411 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PPP4R1Q8TF05 950 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TEKT4Q8WW24 435 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PIH1D2Q8WWB5 315 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TM9SF4Q92544 642 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 MOAP1Q96BY2 351 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 COX14Q96I36 57 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 SLC45A3Q96JT2 553 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 C17orf77Q96MU5 243 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 CTRCQ99895 268 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 CHCHD6Q9BRQ6 235 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 RIOK2Q9BVS4 552 aaKnown RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 TDRD1Q9BXT4 1180 aaKnown RBP6.26□□□□□ -1.41
CSDE1-213ENST00000530784 ABCG8Q9H221 673 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 NT5MQ9NPB1 228 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 VPS18Q9P253 973 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PILRAQ9UKJ1 303 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 PPIL1Q9Y3C6 166 aa6.26□□□□□ -1.41
CSDE1-213ENST00000530784 MYO18BQ8IUG5 2567 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 LRRK1Q38SD2 2015 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 A0A1W2PPI3 338 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 A8MZ25 164 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 OGG1O15527 345 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 MFSD11O43934 449 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 STK17BO94768 372 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 EML2O95834 649 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TFAP2AP05549 437 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TUBBP07437 444 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 INHBAP08476 426 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 PRKCIP41743 596 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 CASP2P42575 452 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 MSH2P43246 934 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 SSR1P43307 286 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 GPR143P51810 404 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 STC1P52823 247 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 HILS1P60008 231 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TUBB4BP68371 445 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 MC1RQ01726 317 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 SLC25A11Q02978 314 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 AIMP2Q13155 320 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 NFATC2Q13469 925 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 KIR2DS3Q14952 304 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 PCGF3Q3KNV8 242 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 FILIP1LQ4L180 1135 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TXNRD3NBQ6F5E7 133 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 IYDQ6PHW0 289 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 CLEC17AQ6ZS10 378 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 ARHGAP22Q7Z5H3 698 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 LRRC49Q8IUZ0 686 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TEX26Q8N6G2 289 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 C1orf52Q8N6N3 182 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 STPG4Q8N801 248 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 NIPA2Q8N8Q9 360 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 AVL9Q8NBF6 648 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 LPCAT1Q8NF37 534 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 FAM76AQ8TAV0 307 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 APOBEC4Q8WW27 367 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 STARD8Q92502 1023 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 SMIM14Q96QK8 99 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 OR2A14Q96R47 310 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 NAT10Q9H0A0 1025 aaKnown RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 HSD3B7Q9H2F3 369 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 AIPL1Q9NZN9 384 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 RCOR3Q9P2K3 495 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TBC1D29Q9UFV1 150 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 ANAPC7Q9UJX3 599 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 ANAPC2Q9UJX6 822 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 KCNK6Q9Y257 313 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 CHKBQ9Y259 395 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 JRKLQ9Y4A0 524 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 TTLL3Q9Y4R7 772 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 SCN8AQ9UQD0 1980 aa6.25□□□□□ -1.41
CSDE1-213ENST00000530784 MN1Q10571 1320 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-213ENST00000530784 UBR5O95071 2799 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 C1orf232A0A0U1RR37 186 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 LOC101059948A0A1B0GTJ6 334 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 A6NCN8 305 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 OR5K4A6NMS3 321 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 POLR1CO15160 346 aaPredicted RBP6.24□□□□□ -1.41
CSDE1-213ENST00000530784 GPC4O75487 556 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 ANKRD34CP0C6C1 535 aa6.24□□□□□ -1.41
CSDE1-213ENST00000530784 SKILP12757 684 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms