RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 XKP51811 444 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 MAPK12P53778 367 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 SLC37A1P57057 533 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 DCAF7P61962 342 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 TRA2BP62995 288 aaKnown RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ERVK-8P63133 956 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 HMGCS1Q01581 520 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 DUSP2Q05923 314 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 MGAT2Q10469 447 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 FUT7Q11130 342 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ASPHQ12797 758 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ZNF267Q14586 743 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 PCLAFQ15004 111 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 MPEG1Q2M385 716 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ZNF750Q32MQ0 723 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 PIGGQ5H8A4 983 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 LIPMQ5VYY2 423 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 SLC48A1Q6P1K1 146 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 GALNT18Q6P9A2 607 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 SCIMPQ6UWF3 145 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 IL20RBQ6UXL0 311 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 FRMD7Q6ZUT3 714 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 CXorf67Q86X51 503 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 HIPK1Q86Z02 1210 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 C10orf107Q8IVU9 208 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 CHERPQ8IWX8 916 aaKnown RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 GPALPP1Q8IXQ4 340 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 TMEM156Q8N614 296 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 GBP7Q8N8V2 638 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 OR4K14Q8NGD5 310 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 OR5L2Q8NGL0 311 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 LILRB4Q8NHJ6 448 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 GOT1L1Q8NHS2 421 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 NUBPLQ8TB37 319 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ASB15Q8WXK1 588 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 RIT1Q92963 219 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 TMEM125Q96AQ2 219 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 APOPT1Q96IL0 206 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ART5Q96L15 291 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 PELOQ9BRX2 385 aaKnown RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 TMEM109Q9BVC6 243 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 GATA5Q9BWX5 397 aaPredicted RBP7.78□□□□□ -1.16
SSBP3-212ENST00000528930 AKTIPQ9H8T0 292 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 CXorf21Q9HAI6 301 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 DEPPQ9NTK1 212 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 SIRT5Q9NXA8 310 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 HEY2Q9UBP5 337 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 COPS7AQ9UBW8 275 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 MCM8Q9UJA3 840 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 ERVK-19Q9WJR5 959 aa7.78□□□□□ -1.16
SSBP3-212ENST00000528930 EML6Q6ZMW3 1958 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 POM121CA8CG34 1229 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 A8MVJ9 347 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 PEX1O43933 1283 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 OR10H2O60403 315 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 TRIM13O60858 407 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 GUCY1B2O75343 617 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 SPAG7O75391 227 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 CPMP14384 443 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 PORP16435 677 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 IRX1P78414 480 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ALDH6A1Q02252 535 aaKnown RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 BTKQ06187 659 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 KRTCAP3Q53RY4 240 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 FAM180BQ6P0A1 224 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 RNF111Q6ZNA4 994 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 GALNT12Q8IXK2 581 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ARFGAP2Q8N6H7 521 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF615Q8N8J6 731 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF441Q8N8Z8 693 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 CCDC63Q8NA47 563 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ZFP62Q8NB50 900 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 POGLUT1Q8NBL1 392 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 FAM98AQ8NCA5 519 aaKnown RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 PSD4Q8NDX1 1056 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 C16orf52Q8NHV5 167 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 C16orf78Q8WTQ4 265 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ROBO4Q8WZ75 1007 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 CNRIP1Q96F85 164 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 Q96MF0 132 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 GPR137Q96N19 417 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF681Q96N22 645 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 FAM111AQ96PZ2 611 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 CNPPD1Q9BV87 410 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 WWTR1Q9GZV5 400 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 HPF1Q9NWY4 346 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 SLC17A7Q9P2U7 560 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 ZNF639Q9UID6 485 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 KLF13Q9Y2Y9 288 aaPredicted RBP7.77□□□□□ -1.17
SSBP3-212ENST00000528930 CCL27Q9Y4X3 112 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 WNK1Q9H4A3 2382 aa7.77□□□□□ -1.17
SSBP3-212ENST00000528930 PINLYPA6NC86 204 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 OR6C76A6NM76 312 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 FAM90A27PA6NNH2 459 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 NPIPA5E9PKD4 350 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 NPIPB8E9PQR5 432 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 KLRC4-KLRK1H3BQV0 150 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 ZNHIT1O43257 154 aa7.76□□□□□ -1.17
SSBP3-212ENST00000528930 ASNA1O43681 348 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms