RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 KRT20P35900 424 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 MDH1P40925 334 aaKnown RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 CCT5P48643 541 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 DNAJB13P59910 316 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 KRTAP10-9P60411 292 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 RAE1P78406 368 aaKnown RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 MRPS22P82650 360 aaKnown RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 EFR3AQ14156 821 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TOMM20Q15388 145 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 FBXL19-AS1Q494R0 122 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TCHHL1Q5QJ38 904 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 BICRALQ6AI39 1079 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 SCIMPQ6UWF3 145 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 ARSKQ6UWY0 536 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 WDR53Q7Z5U6 358 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 C16orf78Q8WTQ4 265 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.33
CAPN1-212ENST00000527887 SLC35A4Q96G79 324 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 APIPQ96GX9 242 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 OSBPL11Q9BXB4 747 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 GSTO2Q9H4Y5 243 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 CCDC134Q9H6E4 229 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 TAS2R9Q9NYW1 312 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 KLRF1Q9NZS2 232 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 GRID1Q9ULK0 1009 aa12.96□□□□□ -0.33
CAPN1-212ENST00000527887 PHF3Q92576 2039 aaKnown RBP12.96□□□□□ -0.34
CAPN1-212ENST00000527887 GOLGA8RI6L899 631 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 GNB5O14775 395 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 UGT2B11O75310 529 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 ANXA4P09525 319 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-212ENST00000527887 MYL2P10916 166 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 CPN1P15169 458 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 CHN1P15882 459 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 BMP7P18075 431 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 KRT4P19013 534 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 DDCP20711 480 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 PNLIPRP2P54317 469 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 CBX1P83916 185 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 HMGCS1Q01581 520 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 DUSP2Q05923 314 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 MYBPHQ13203 477 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 RCAN2Q14206 197 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 LTB4RQ15722 352 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 ENPP6Q6UWR7 440 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 ANGPTL8Q6UXH0 198 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 ZYG11AQ6WRX3 759 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 SPNS3Q6ZMD2 512 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 SEM1Q6ZVN7 128 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 TRIM46Q7Z4K8 759 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 BANPQ8N9N5 519 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 FAM83FQ8NEG4 500 aaPredicted RBP12.95□□□□□ -0.34
CAPN1-212ENST00000527887 RDH11Q8TC12 318 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 VSTM2LQ96N03 204 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 NODALQ96S42 347 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 UGT2B28Q9BY64 529 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 MID1IP1Q9NPA3 183 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 NKIRAS1Q9NYS0 192 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 TAS2R7Q9NYW3 318 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 CAMK2AQ9UQM7 478 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 MRPS18CQ9Y3D5 142 aaKnown RBP12.95□□□□□ -0.34
CAPN1-212ENST00000527887 L3MBTL1Q9Y468 752 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 TIMM22Q9Y584 194 aa12.95□□□□□ -0.34
CAPN1-212ENST00000527887 A0A087WV62 115 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 TMEM120BA0PK00 339 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 PRAMEF25A6NGN4 478 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 G3V2L1 256 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 COQ9O75208 318 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 REM1O75628 298 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 IL18BPO95998 194 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 IFI6P09912 130 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CT45A8P0DMV1 189 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CT45A9P0DMV2 189 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 POU3F2P20265 443 aaPredicted RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CRHR1P34998 444 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 PTGDSP41222 190 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 HTR6P50406 440 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 ASCL1P50553 236 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 DLX5P56178 289 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 EEF1A1P68104 462 aaKnown RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 ZNF763Q0D2J5 394 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 TESK1Q15569 626 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 NNATQ16517 81 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 IMPG1Q17R60 797 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 EIPR1Q53HC9 387 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CT45A2Q5DJT8 189 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 SPDYAQ5MJ70 313 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 PLCZ1Q86YW0 608 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 FAM9CQ8IZT9 166 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 CCNYL1Q8N7R7 359 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 RNASE6Q93091 150 aaKnown RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 TMBIM1Q969X1 311 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 EXOSC8Q96B26 276 aaKnown RBP12.94□□□□□ -0.34
CAPN1-212ENST00000527887 WDYHV1Q96HA8 205 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 ZFP3Q96NJ6 502 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 BBS4Q96RK4 519 aa12.94□□□□□ -0.34
CAPN1-212ENST00000527887 INTS9Q9NV88 658 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms