RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CD97P48960 835 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TSPAN31Q12999 210 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 SYT14P1Q58G82 188 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 PRRT3Q5FWE3 981 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 MFSD12Q6NUT3 480 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 CAMKVQ8NCB2 501 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TOR1AIP2Q8NFQ8 470 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 RNF217Q8TC41 542 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 DIO2Q92813 273 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 KAT2AQ92830 837 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 PRRG3Q9BZD7 231 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TMEM168Q9H0V1 697 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 HHATLQ9HCP6 504 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 MRPS18AQ9NVS2 196 aaKnown RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 PTGFRNQ9P2B2 879 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 SEC14L4Q9UDX3 406 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 H0Y8X5 98 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 B3GALT2O43825 422 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 RAB36O95755 333 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 PORP16435 677 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 UGT2B7P16662 529 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 MAGP20916 626 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 ETV6P41212 452 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 MLLT11Q13015 90 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 LTB4RQ15722 352 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 KLHL22Q53GT1 634 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 SLC27A4Q6P1M0 643 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 RASSF6Q6ZTQ3 369 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 USP53Q70EK8 1073 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 ABHD13Q7L211 337 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 VRK2Q86Y07 508 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 OR2L13Q8N349 312 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 IQCF1Q8N6M8 205 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 OR52P1PQ8NH57 321 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 TEX47Q8TBZ9 253 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 RSC1A1Q92681 617 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 SLC35A4Q96G79 324 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 FCRL4Q96PJ5 515 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 GPA33Q99795 319 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 QRSL1Q9H0R6 528 aaKnown RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 MTHFD2LQ9H903 347 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 TESQ9UGI8 421 aaKnown RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 DAPP1Q9UN19 280 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 PNMA8CA0A1B0GUJ8 204 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 LRRC72A6NJI9 287 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 RASGRP1O95267 797 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 CCNYL3P0C7X3 344 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 PSMA1P25786 263 aaKnown RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 MAGEA10P43363 369 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 SRP54P61011 504 aaKnown RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 SOWAHCQ53LP3 525 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 ACSM5Q6NUN0 579 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 FIGLAQ6QHK4 219 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 WDR53Q7Z5U6 358 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 HMGN2P46Q86SG4 172 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 CYP4Z2PQ8N1L4 340 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 DNAJC5GQ8N7S2 189 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 OR7G2Q8NG99 324 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 TMEM163Q8TC26 289 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 ZNF582Q96NG8 517 aaPredicted RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 RNF167Q9H6Y7 350 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 CACYBPQ9HB71 228 aaKnown RBP14.38□□□□□ -0.11
USH1C-207ENST00000527720 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 TRPV5Q9NQA5 729 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 PILRAQ9UKJ1 303 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 CA5BQ9Y2D0 317 aa14.38□□□□□ -0.11
USH1C-207ENST00000527720 A0A075B6Q4 140 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 FAM170BA6NMN3 283 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 AP3D1O14617 1153 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 MYL12BO14950 172 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 AKT2P31751 481 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 ACSL1P33121 698 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 SNAPC1Q16533 368 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 DECR1Q16698 335 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 ARHGAP11BQ3KRB8 267 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 FCRL6Q6DN72 434 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 FAM111BQ6SJ93 734 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 KIAA1324Q6UXG2 1013 aaKnown RBP14.37□□□□□ -0.11
USH1C-207ENST00000527720 RRM2BQ7LG56 351 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 KIF18BQ86Y91 864 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 OR9Q1Q8NGQ5 310 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 PIGXQ8TBF5 258 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 LRR1Q96L50 414 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 SP140LQ9H930 580 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 NDUFB11Q9NX14 153 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 CLEC2DQ9UHP7 191 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 CHST2Q9Y4C5 530 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 ENTPD2Q9Y5L3 495 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 SLC22A7Q9Y694 548 aa14.37□□□□□ -0.11
USH1C-207ENST00000527720 FAM221BA6H8Z2 402 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 PRODHO43272 600 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 CTSVO60911 334 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 GPX5O75715 221 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 MED26O95402 600 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 PDX1P52945 283 aa14.36□□□□□ -0.11
USH1C-207ENST00000527720 RAB40BQ12829 278 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms