RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NCOR1O75376 2440 aa4.23□□□□□ -1.73
USP48-211ENST00000526044 VCANP13611 3396 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SDK1Q7Z5N4 2213 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PCDH15Q96QU1 1955 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ZNF318Q5VUA4 2279 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TMEM120BA0PK00 339 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 LNP1A1A4G5 178 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CPED1A4D0V7 1026 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NCF1BA6NI72 391 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 FAM90A8PA6NJQ4 464 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 C4orf47A7E2U8 309 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NCF1CA8MVU1 366 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 ARHGEF33A8MVX0 844 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SUPT3HB4E1H0 165 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 STMND1H3BQB6 276 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 UBXN8O00124 270 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TNFRSF13BO14836 293 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 PLIN3O60664 434 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 KERAO60938 352 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SUPT3HO75486 399 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 GOSR1O95249 250 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 FAM90A13PP0C7W8 464 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 FAM90A24PP0C7X0 464 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 GIMD1P0DJR0 217 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 MYL2P10916 166 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NEFHP12036 1026 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 GFAPP14136 432 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NCF1P14598 390 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 ARSBP15848 533 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 AMD1P17707 334 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 IMPDH1P20839 514 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 FASLGP48023 281 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 RFX2P48378 723 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 HNMTP50135 292 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 DUSP3P51452 185 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 MAZP56270 477 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 AP1S2P56377 157 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 UBE2IP63279 158 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 CDKL1Q00532 357 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ASPHQ12797 758 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 EFR3AQ14156 821 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ARHGAP19Q14CB8 494 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TGFBIQ15582 683 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PHKG1Q16816 387 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CCSMST1Q4G0I0 132 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 C14orf28Q4W4Y0 310 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TECRLQ5HYJ1 363 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CDKL4Q5MAI5 379 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 HHATQ5VTY9 493 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SULT1C3Q6IMI6 304 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 DUS1LQ6P1R4 473 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 SHQ1Q6PI26 577 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 AGTRAPQ6RW13 159 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TMEM26Q6ZUK4 368 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 AMIGO1Q86WK6 493 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 C17orf82Q86X59 251 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 NUDCD3Q8IVD9 361 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 DCUN1D3Q8IWE4 304 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ZDHHC23Q8IYP9 409 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 TCAIMQ8N3R3 496 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SFRP1Q8N474 314 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 FBXO39Q8N4B4 442 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 C2orf73Q8N5S3 287 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 ARFGAP2Q8N6H7 521 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 OR6C4Q8NGE1 309 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 OR4C6Q8NH72 309 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SLC37A2Q8TED4 501 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CREB3L4Q8TEY5 395 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PPP4R1Q8TF05 950 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ASB5Q8WWX0 329 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 LCN9Q8WX39 176 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PATE1Q8WXA2 126 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 EXT2Q93063 718 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 LYZL4Q96KX0 146 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 APOLD1Q96LR9 279 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 C7orf26Q96N11 449 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 FAM111AQ96PZ2 611 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 ATOH8Q96SQ7 321 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PKP4Q99569 1192 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SLX1AQ9BQ83 275 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 EDEM2Q9BV94 578 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 SF3B5Q9BWJ5 86 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 SRMSQ9H3Y6 488 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 KIR3DX1Q9H7L2 352 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CNOT10Q9H9A5 744 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 KRCC1Q9NPI7 259 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 INTS9Q9NV88 658 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 HIF1ANQ9NWT6 349 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 HRASLS2Q9NWW9 162 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NUDT4Q9NZJ9 180 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 NCKIPSDQ9NZQ3 722 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 CPSF2Q9P2I0 782 aaKnown RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 SLC17A7Q9P2U7 560 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 PLEKHB1Q9UF11 243 aaPredicted RBP4.22□□□□□ -1.73
USP48-211ENST00000526044 RPS6KA6Q9UK32 745 aa4.22□□□□□ -1.73
USP48-211ENST00000526044 EMCNQ9ULC0 261 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms