RNA–Protein interactions for RNA: ENST00000525997.1

PUM1-216, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-216	ENST00000525997	RPS19BP1	Q86WX3	136 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	PROSER1	Q86XN7	944 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	RNF130	Q86XS8	419 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	KRT73	Q86Y46	540 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	APLF	Q8IW19	511 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	C10orf67	Q8IYJ2	551 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	DEFB107A	Q8IZN7	70 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ZNF615	Q8N8J6	731 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ZNF527	Q8NB42	609 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	APCDD1L	Q8NCL9	501 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	C11orf65	Q8NCR3	313 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	HIPK4	Q8NE63	616 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	NFAM1	Q8NET5	270 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	OR5AK3P	Q8NH89	298 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	C16orf52	Q8NHV5	167 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	BBS10	Q8TAM1	723 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	GPR151	Q8TDV0	419 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ELP5	Q8TE02	316 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ZNF721	Q8TF20	911 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ASB15	Q8WXK1	588 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	SLC9A6	Q92581	669 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	UCN3	Q969E3	161 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	C8orf44	Q96CB5	159 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	REXO5	Q96IC2	774 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	THOC3	Q96J01	351 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	LCOR	Q96JN0	433 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	RNF145	Q96MT1	663 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	VSTM2L	Q96N03	204 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	AGAP4	Q96P64	663 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	BTBD9	Q96Q07	612 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	TRNT1	Q96Q11	434 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ZNF607	Q96SK3	696 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	WDR77	Q9BQA1	342 aa	Predicted RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	BTBD10	Q9BSF8	475 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	INPP5K	Q9BT40	448 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	NUDT9	Q9BW91	350 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	BTBD2	Q9BX70	525 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	TRIM15	Q9C019	465 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	WWTR1	Q9GZV5	400 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	HOXD1	Q9GZZ0	328 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	PIGU	Q9H490	435 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	TMEM38A	Q9H6F2	299 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	IL1RL2	Q9HB29	575 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	FOLH1B	Q9HBA9	442 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	SLAMF7	Q9NQ25	335 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	SLC52A3	Q9NQ40	469 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ARL8B	Q9NVJ2	186 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	GPR83	Q9NYM4	423 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	ADA2	Q9NZK5	511 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	VAPA	Q9P0L0	249 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	IL17B	Q9UHF5	180 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	RALY	Q9UKM9	306 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	CBLC	Q9ULV8	474 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	YARS2	Q9Y2Z4	477 aa	Known RBP	4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	UNC79	Q9P2D8	2635 aa		4.87	□□□□□ -1.63
PUM1-216	ENST00000525997	DSP	P15924	2871 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	AHCTF1	Q8WYP5	2266 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	FASN	P49327	2511 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	ITPR1	Q14643	2758 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	TRBV5-3	A0A0A0MS03	114 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	IGHV3-20	A0A0C4DH32	117 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	MYOCOS	A0A1B0GUC4	107 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	ELOVL7	A1L3X0	281 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	ASPDH	A6ND91	283 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	PRORSD1P	A6NEY8	169 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	OR2W5	A6NFC9	320 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	ARGFX	A6NJG6	315 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997		A8MVJ9	347 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	MKRN2OS	H3BPM6	223 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	GSTA4	O15217	222 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	NKX2-8	O15522	239 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	STX11	O75558	287 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	SERPINB7	O75635	380 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CIB2	O75838	187 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	DNAJC8	O75937	253 aa	Predicted RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	GSN	P06396	782 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CT62	P0C5K7	136 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	SFTPC	P11686	197 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	S1PR1	P21453	382 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	HTR1E	P28566	365 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	GABRA3	P34903	492 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	PCGF2	P35227	344 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	PIGA	P37287	484 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CDKN2C	P42773	168 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CPA2	P48052	419 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	EMD	P50402	254 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	NR0B1	P51843	470 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	PNLIPRP2	P54317	469 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	MTPN	P58546	118 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	TLE3	Q04726	772 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	DUSP2	Q05923	314 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	MGAT2	Q10469	447 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	VEZF1	Q14119	521 aa		4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	ELOA	Q14241	798 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CAPRIN1	Q14444	709 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	EXOSC7	Q15024	291 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-216	ENST00000525997	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms