RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 MAPRE3Q9UPY8 281 aa11.32□□□□□ -0.6
CCDC90B-205ENST00000525916 A0A1W2PS29 197 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 GLOD5A6NK44 160 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 STX16-NPEPL1H3BU86 382 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PLOD2O00469 737 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 COPEO14579 308 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 STX16O14662 325 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PLIN3O60664 434 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 STK16O75716 305 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PROCP04070 461 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PCNAP12004 261 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PAX1P15863 534 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 EPORP19235 508 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 UGT2B10P36537 528 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 NRG3P56975 720 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 RPP38P78345 283 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 CHIT1Q13231 466 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 BIKQ13323 160 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 VEZF1Q14119 521 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PDK4Q16654 411 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 CCDC153Q494R4 210 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 TMEM35AQ53FP2 167 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 HLA-DQA1Q5Y7H0 255 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 OR4C11Q6IEV9 310 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 ZNF474Q6S9Z5 364 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 C22orf34Q6ZV56 151 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 LRRC70Q7Z2Q7 622 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 HDXQ7Z353 690 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 GPR180Q86V85 440 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 EXOC3L1Q86VI1 746 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 CNEP1R1Q8N9A8 125 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 OR14L1PQ8NHC6 308 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 EXT2Q93063 718 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 TP53INP1Q96A56 240 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 CTHRC1Q96CG8 243 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 STARD4Q96DR4 205 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 APOPT1Q96IL0 206 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 OPN3Q9H1Y3 402 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 OR51B5Q9H339 312 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 GALNT9Q9HCQ5 603 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 SSU72Q9NP77 194 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 ZNF701Q9NV72 531 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 MS4A12Q9NXJ0 267 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 CPSF2Q9P2I0 782 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 ADGRE2Q9UHX3 823 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PHF11Q9UIL8 331 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 PLLPQ9Y342 182 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 ACTL7BQ9Y614 415 aa11.31□□□□□ -0.6
CCDC90B-205ENST00000525916 A8MT66 165 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 K7EPI3 171 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 TYROBPO43914 113 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 SMIM24O75264 130 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 GPR75O95800 540 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 F12P00748 615 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 CT62P0C5K7 136 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 GFAPP14136 432 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 POU2F1P14859 743 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 CREB1P16220 341 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 CHMP24386 653 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 ABCD3P28288 659 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 PTGDSP41222 190 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 LHX2P50458 406 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 RPS13P62277 151 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 IRF8Q02556 426 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 LAPTM5Q13571 262 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 E2F2Q14209 437 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 NNATQ16517 81 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 HIST2H2ACQ16777 129 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 PFKFB4Q16877 469 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 PAGE2BQ5JRK9 111 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 KHDRBS2Q5VWX1 349 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 HIST2H2AA3Q6FI13 130 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 BTLAQ7Z6A9 289 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 IFNEQ86WN2 208 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 HIPK1Q86Z02 1210 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 UCN3Q969E3 161 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 ADIPOR1Q96A54 375 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 NODALQ96S42 347 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 OSBPL11Q9BXB4 747 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 C1QTNF3Q9BXJ4 246 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 OR2B2Q9GZK3 357 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 CXorf56Q9H5V9 222 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 ACTR8Q9H981 624 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 TMBIM4Q9HC24 238 aa11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 TNPO3Q9Y5L0 923 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-205ENST00000525916 UQCRHLA0A096LP55 91 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 G3V2L1 256 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 PLPP1O14494 284 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 PHF1O43189 567 aaPredicted RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 HCRTR2O43614 444 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 DLX3O60479 287 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 CCNT2O60583 730 aaKnown RBP11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 ICOSLGO75144 302 aa11.29□□□□□ -0.6
CCDC90B-205ENST00000525916 ABCB1P08183 1280 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms