RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-204ENST00000521331 EFR3AQ14156 821 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 BCL2A1Q16548 175 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 SGO1Q5FBB7 561 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 Q5PR19 223 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 SIMC1Q8NDZ2 872 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF675Q8TD23 568 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF592Q92610 1267 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 SLC35A4Q96G79 324 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 COX4I2Q96KJ9 171 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 NSUN5Q96P11 429 aaKnown RBP13.49□□□□□ -0.25
PRKDC-204ENST00000521331 BTBD9Q96Q07 612 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF226Q9NYT6 803 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
PRKDC-204ENST00000521331 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-204ENST00000521331 MED12Q93074 2177 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 FN1P02751 2386 aaKnown RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 OTCP00480 354 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 FPR1P21462 350 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 PHBP35232 272 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 KRT20P35900 424 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 MRPS22P82650 360 aaKnown RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 DUSP2Q05923 314 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 LTB4RQ15722 352 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 PRSS57Q6UWY2 283 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 PLXDC2Q6UX71 529 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 P4HA3Q7Z4N8 544 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 SAMD14Q8IZD0 417 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 PLD6Q8N2A8 252 aaKnown RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 SELENOMQ8WWX9 145 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 ADOQ96SZ5 270 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 PFDN4Q9NQP4 134 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 XPR1Q9UBH6 696 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 UTS2RQ9UKP6 389 aa13.48□□□□□ -0.25
PRKDC-204ENST00000521331 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 TGM6O95932 706 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 PDYNP01213 254 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 RPS17P08708 135 aaKnown RBP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 GRK2P25098 689 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 DPP4P27487 766 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 IL12BP29460 328 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 CD79BP40259 229 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 MC3RP41968 323 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 TRADDQ15628 312 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 OR4K17Q8NGC6 315 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 WFIKKN1Q96NZ8 548 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 FARSBQ9NSD9 589 aaKnown RBP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 C6orf203Q9P0P8 240 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-204ENST00000521331 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
PRKDC-204ENST00000521331 DNHD1Q96M86 4753 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 EXPH5Q8NEV8 1989 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 SLC22A20A6NK97 555 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 DEFB108AA8MXU0 73 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 ZIC3O60481 467 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 TSPAN2O60636 221 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 ESRRBO95718 433 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 LY6G6DO95868 133 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CT45A8P0DMV1 189 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CT45A9P0DMV2 189 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 COL6A2P12110 1019 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 PEPDP12955 493 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CRYGSP22914 178 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 MAGEA12P43365 314 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 PNLIPRP2P54317 469 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 DSCR4P56555 118 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-204ENST00000521331 EEFSECP57772 596 aaKnown RBP13.46□□□□□ -0.25
PRKDC-204ENST00000521331 ACKR1Q16570 336 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CT45A2Q5DJT8 189 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 FAM180BQ6P0A1 224 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 LETMD1Q6P1Q0 360 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 LARP4Q71RC2 724 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CCDC116Q8IYX3 515 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 MEIOBQ8N635 442 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-204ENST00000521331 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 RNF138Q8WVD3 245 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 VSTM2LQ96N03 204 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 CCL19Q99731 98 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 MRPL57Q9BQC6 102 aaKnown RBP13.46□□□□□ -0.25
PRKDC-204ENST00000521331 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
PRKDC-204ENST00000521331 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms