RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 GABRA3P34903 492 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 TRHRP34981 398 aaPredicted RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 CCL11P51671 97 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 NR0B1P51843 470 aaKnown RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 MLF1P58340 268 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 SLC15A3Q8IY34 581 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 SLC15A4Q8N697 577 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 SIRT6Q8N6T7 355 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 SLC7A6OSQ96CW6 309 aaPredicted RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 OTUB1Q96FW1 271 aaPredicted RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 ZNF354BQ96LW1 612 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 CDCP1Q9H5V8 836 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 KAT8Q9H7Z6 458 aaKnown RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 LIN28AQ9H9Z2 209 aaKnown RBP16.46■□□□□ 0.23
SDC2-205ENST00000520233 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 L3MBTL1Q9Y468 752 aa16.46■□□□□ 0.23
SDC2-205ENST00000520233 TNFRSF21O75509 655 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 SOX11P35716 441 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 RASSF2P50749 326 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 SLC7A2P52569 658 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 NRG3P56975 720 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 DSTNP60981 165 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 CXADRP78310 365 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 NNATQ16517 81 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 MEP1AQ16819 746 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 CYP27C1Q4G0S4 372 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 CRB2Q5IJ48 1285 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 FCRLBQ6BAA4 426 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 C16orf47Q6ZP98 133 aaPredicted RBP16.45■□□□□ 0.22
SDC2-205ENST00000520233 DEFB107AQ8IZN7 70 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 TAGAPQ8N103 731 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 C10orf111Q8N326 155 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 COX18Q8N8Q8 333 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 SLC22A8Q8TCC7 542 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 XAGE5Q8WWM1 108 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 PIK3R3Q92569 461 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 CDS1Q92903 461 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 RAB8BQ92930 207 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 ECSITQ9BQ95 431 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 BTBD2Q9BX70 525 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 SPAG4Q9NPE6 437 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 EXD2Q9NVH0 621 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 TMEM181Q9P2C4 612 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 ABCD2Q9UBJ2 740 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 TEKT2Q9UIF3 430 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 CBLCQ9ULV8 474 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 YARS2Q9Y2Z4 477 aaKnown RBP16.45■□□□□ 0.22
SDC2-205ENST00000520233 OR10H1Q9Y4A9 318 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 KCNE3Q9Y6H6 103 aa16.45■□□□□ 0.22
SDC2-205ENST00000520233 NUP214P35658 2090 aaPredicted RBP16.45■□□□□ 0.22
SDC2-205ENST00000520233 NCOR2Q9Y618 2525 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 GXYLT2A0PJZ3 443 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 A8MVJ9 347 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 ITGA10O75578 1167 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 CEACAM4O75871 244 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 OR2J2O76002 312 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 NADKO95544 446 aaPredicted RBP16.44■□□□□ 0.22
SDC2-205ENST00000520233 AK1P00568 194 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 PIGAP37287 484 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 GZMMP51124 257 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 EEFSECP57772 596 aaKnown RBP16.44■□□□□ 0.22
SDC2-205ENST00000520233 POU6F2P78424 691 aaPredicted RBP16.44■□□□□ 0.22
SDC2-205ENST00000520233 ACER2Q5QJU3 275 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 ATAD3BQ5T9A4 648 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 B3GNTL1Q67FW5 361 aaPredicted RBP16.44■□□□□ 0.22
SDC2-205ENST00000520233 HEPHL1Q6MZM0 1159 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 SERPINA11Q86U17 422 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 CALHM3Q86XJ0 350 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 CHDHQ8NE62 594 aaPredicted RBP16.44■□□□□ 0.22
SDC2-205ENST00000520233 OR4N2Q8NGD1 307 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 OR10A6Q8NH74 314 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 RASL10BQ96S79 203 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 SPATA9Q9BWV2 254 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 GPR83Q9NYM4 423 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 ZMIZ1Q9ULJ6 1067 aa16.44■□□□□ 0.22
SDC2-205ENST00000520233 A6NL46 340 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 NME4O00746 187 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 GYG2O15488 501 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 MAN1A2O60476 641 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 NUDT7P0C024 238 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 NAGAP17050 411 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 SSR4P51571 173 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 MRPS22P82650 360 aaKnown RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 DECR1Q16698 335 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 ARHGAP11BQ3KRB8 267 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 DNAL1Q4LDG9 190 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 LACTB2Q53H82 288 aaPredicted RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 GCNT6Q5T4J0 391 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 ABHD17BQ5VST6 288 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 AGAP7PQ5VUJ5 663 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 BORAQ6PGQ7 559 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 NET1Q7Z628 596 aaPredicted RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 SLC34A3Q8N130 599 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 BCORP1Q8N888 145 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 FAM110BQ8TC76 370 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 RMND5BQ96G75 393 aaPredicted RBP16.43■□□□□ 0.22
SDC2-205ENST00000520233 AGAP4Q96P64 663 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 CDRT15Q96T59 188 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 BTBD10Q9BSF8 475 aa16.43■□□□□ 0.22
SDC2-205ENST00000520233 TMEM38AQ9H6F2 299 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms