RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 Q8N9G6 341 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-213ENST00000519553 DQX1Q8TE96 717 aaKnown RBP4.43□□□□□ -1.7
PTPN12-213ENST00000519553 DNAJA3Q96EY1 480 aa4.43□□□□□ -1.7
PTPN12-213ENST00000519553 CNOT6LQ96LI5 555 aaKnown RBP4.43□□□□□ -1.7
PTPN12-213ENST00000519553 FAM114A2Q9NRY5 505 aa4.43□□□□□ -1.7
PTPN12-213ENST00000519553 IL20RAQ9UHF4 553 aa4.43□□□□□ -1.7
PTPN12-213ENST00000519553 FZR1Q9UM11 496 aa4.43□□□□□ -1.7
PTPN12-213ENST00000519553 KLF18A0A0U1RQI7 1052 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 CFAP73A6NFT4 308 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ARHGAP42A6NI28 874 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 NPIPA2E9PIF3 369 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 C11orf98E9PRG8 122 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 SLC17A2O00624 439 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 DUSP14O95147 198 aaKnown RBP4.42□□□□□ -1.7
PTPN12-213ENST00000519553 SLC2A10O95528 541 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ALPPP05187 535 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ALPPL2P10696 532 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 NUMBP49757 651 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 STARD6P59095 220 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 FUT7Q11130 342 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 EIF2B1Q14232 305 aaKnown RBP4.42□□□□□ -1.7
PTPN12-213ENST00000519553 QRICH1Q2TAL8 776 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 PAN3Q58A45 887 aaKnown RBP4.42□□□□□ -1.7
PTPN12-213ENST00000519553 OR6B2Q6IFH4 312 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 C2orf66Q6UXQ4 117 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 PAQR9Q6ZVX9 377 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 MIER3Q7Z3K6 550 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 CCDC36Q8IYA8 594 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 GPR137CQ8N3F9 429 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ARFGAP2Q8N6H7 521 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 WDR36Q8NI36 951 aaKnown RBP4.42□□□□□ -1.7
PTPN12-213ENST00000519553 VSIG2Q96IQ7 327 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ABCG8Q9H221 673 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 ZNF275Q9NSD4 429 aaPredicted RBP4.42□□□□□ -1.7
PTPN12-213ENST00000519553 VNN3Q9NY84 501 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 DHRS7Q9Y394 339 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 RPGRIP1LQ68CZ1 1315 aa4.42□□□□□ -1.7
PTPN12-213ENST00000519553 G3V3Y1 287 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 IMPA2O14732 288 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 GPAA1O43292 621 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 LCMT2O60294 686 aaKnown RBP4.41□□□□□ -1.7
PTPN12-213ENST00000519553 GHRP10912 638 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 PRDX2P32119 198 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 STK19P49842 368 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-213ENST00000519553 NDPQ00604 133 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 ZP4Q12836 540 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 PARP6Q2NL67 630 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 OLFML2AQ68BL7 652 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 PNCKQ6P2M8 343 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 NEK5Q6P3R8 708 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 LEG1Q6P5S2 330 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 OLFM4Q6UX06 510 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 HACD2Q6Y1H2 254 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 HCAR1Q9BXC0 346 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 DBNDD1Q9H9R9 158 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 DCAF13Q9NV06 445 aaKnown RBP4.41□□□□□ -1.7
PTPN12-213ENST00000519553 CNOT2Q9NZN8 540 aaKnown RBP4.41□□□□□ -1.7
PTPN12-213ENST00000519553 SLC2A6Q9UGQ3 507 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 ZNF490Q9ULM2 529 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-213ENST00000519553 FKBP7Q9Y680 259 aa4.41□□□□□ -1.7
PTPN12-213ENST00000519553 FBLL1A6NHQ2 334 aaKnown RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 FAM220BPB1ANY3 271 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 DUX4L4P0CJ87 422 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 METAP1P53582 386 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 ERVPABLB-1P60509 514 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 NOP14P78316 857 aaKnown RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 PDK1Q15118 436 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 FHL5Q5TD97 284 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 LGSNQ5TDP6 509 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 TATDN1Q6P1N9 297 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 GPR65Q8IYL9 337 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 CENPSQ8N2Z9 138 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 U2AF1L4Q8WU68 220 aaKnown RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 BADQ92934 168 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 SLC25A36Q96CQ1 311 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 NSMCE2Q96MF7 247 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 CASD1Q96PB1 797 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 YTHDF1Q9BYJ9 559 aaKnown RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 NACA2Q9H009 215 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 OPN3Q9H1Y3 402 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
PTPN12-213ENST00000519553 MIEF1Q9NQG6 463 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 CLIP2Q9UDT6 1046 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 BCAP29Q9UHQ4 241 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 CCPG1Q9ULG6 757 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 MOKQ9UQ07 419 aa4.4□□□□□ -1.71
PTPN12-213ENST00000519553 TRBV7-9A0A0J9YWB2 115 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 NDUFA7O95182 113 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 XCR1P46094 333 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 WASHC5Q12768 1159 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 GAMTQ14353 236 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 CCDC40Q4G0X9 1142 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF562Q6V9R5 426 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 ERICH1Q86X53 443 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 TFB1MQ8WVM0 346 aaKnown RBP4.39□□□□□ -1.71
PTPN12-213ENST00000519553 OR5M11Q96RB7 305 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 SPXQ9BT56 116 aa4.39□□□□□ -1.71
PTPN12-213ENST00000519553 CARD6Q9BX69 1037 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms