RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 C12orf56Q8IXR9 622 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RCOR2Q8IZ40 523 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 Q8N9G6 341 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PNLDC1Q8NA58 520 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RELL2Q8NC24 303 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM98AQ8NCA5 519 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FBXL13Q8NEE6 735 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PROKR2Q8NFJ6 384 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR7G2Q8NG99 324 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR13C9Q8NGT0 318 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR1F12Q8NHA8 337 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OSR1Q8TAX0 266 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 NANPQ8TBE9 248 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM163Q8TC26 289 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 GPR148Q8TDV2 347 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 WFIKKN2Q8TEU8 576 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TNFRSF14Q92956 283 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 MTBPQ96DY7 904 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 LMLNQ96KR4 655 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 AGAP4Q96P64 663 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FMO2Q99518 471 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 DUSP16Q9BY84 665 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TM6SF2Q9BZW4 377 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SMYD3Q9H7B4 428 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 POLD4Q9HCU8 107 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 A4GALTQ9NPC4 353 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 MYOZ2Q9NPC6 264 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 THSD1Q9NS62 852 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TXLNGQ9NUQ3 528 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 POT1Q9NUX5 634 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF701Q9NV72 531 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 C2orf42Q9NWW7 574 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 IFNKQ9P0W0 207 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 UXTQ9UBK9 157 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ENPP5Q9UJA9 477 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RNF6Q9Y252 685 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 EXOGQ9Y2C4 368 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC6A5Q9Y345 797 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBMX2Q9Y388 322 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RIPK3Q9Y572 518 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SNED1Q8TER0 1413 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPAP1Q9BWH6 1393 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 IQANK1A0A1B0GTG1 560 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FBLL1A6NHQ2 334 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 IMPA2O14732 288 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FPGTO14772 594 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CASKO14936 926 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CLOCKO15516 846 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CFLARO15519 480 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 B4GAT1O43505 415 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 LDB2O43679 373 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 BUD23O43709 281 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 OR2J3O76001 311 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 B3GAT3O94766 335 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRATO95237 230 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TFAP2AP05549 437 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 GSTA1P08263 222 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FGF5P12034 268 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 NQO2P16083 231 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 LHCGRP22888 699 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBMS1P29558 406 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPL9P32969 192 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 HPCAL1P37235 193 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 MMP12P39900 470 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC1A2P43004 574 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CRATP43155 626 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CCNHP51946 323 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ACLYP53396 1101 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ATP12AP54707 1039 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ISL1P61371 349 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDK16Q00536 496 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 HSF1Q00613 529 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 STX3Q13277 289 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TFDP1Q14186 410 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FASTKD3Q14CZ7 662 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 SF3B4Q15427 424 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CHI3L2Q15782 390 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ETFDHQ16134 617 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 DUSP6Q16828 381 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM35AQ53FP2 167 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 BEND6Q5SZJ8 279 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 NT5DC1Q5TFE4 455 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLX4IPQ5VYV7 408 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 DMKNQ6E0U4 476 aaPredicted RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TYW3Q6IPR3 259 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 RFPL4BQ6ZWI9 263 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 UTS2BQ765I0 119 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 ASRGL1Q7L266 308 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 H2BFWTQ7Z2G1 175 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRPL10Q7Z7H8 261 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRGPREQ86SM8 312 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CYP4Z1Q86W10 505 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 NUDCD3Q8IVD9 361 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 MMAAQ8IVH4 418 aaKnown RBP3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CLDN19Q8N6F1 224 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 POC1AQ8NBT0 407 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FBXO36Q8NEA4 188 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDC26Q8NHZ8 85 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM174Q8WUU8 243 aa3.56□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM168AQ92567 244 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms