RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MCMBPQ9BTE3 642 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CHID1Q9BWS9 393 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CHRNA10Q9GZZ6 450 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF700Q9H0M5 742 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 MMP28Q9H239 520 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TFB2MQ9H5Q4 396 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 KIR3DX1Q9H7L2 352 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 MVB12BQ9H7P6 319 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TRIM45Q9H8W5 580 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PPCSQ9HAB8 311 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 POPDC3Q9HBV1 291 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GP6Q9HCN6 339 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SSU72Q9NP77 194 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 NOX4Q9NPH5 578 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ENAMQ9NRM1 1142 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 C20orf96Q9NUD7 363 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 HRASLS2Q9NWW9 162 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TAS2R13Q9NYV9 303 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 OR6C2Q9NZP2 312 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SPRR3Q9UBC9 169 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 STOML1Q9UBI4 398 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF282Q9UDV7 671 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC23A2Q9UGH3 650 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FETUBQ9UGM5 382 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC2A6Q9UGQ3 507 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SCOCQ9UIL1 159 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FBXO5Q9UKT4 447 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 RNF115Q9Y4L5 304 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 MAD1L1Q9Y6D9 718 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ARFGEF3Q5TH69 2177 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SCN3AQ9NY46 2000 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 LOC102723996A0A087X1L8 192 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 A0A0J9YVX5 310 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 LOC390937A0A1W2PQ73 354 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 GSAPA4D1B5 854 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM159BA6NKW6 160 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 OR2AG2A6NM03 316 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 OR52A4PA6NMU1 304 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF839A8K0R7 811 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 PDZK1P1A8MUH7 402 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 AHRRA9YTQ3 701 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 GOLGA8MH3BSY2 632 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 GFYI3L273 518 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 FCHO1O14526 889 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 HCRTR1O43613 425 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 TRAF3IP2O43734 574 aaPredicted RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 OR1I1O60431 355 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 LILRA1O75019 489 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SPAG7O75391 227 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 MTX2O75431 263 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 VPS26AO75436 327 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 HAUS5O94927 633 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SLITRK5O94991 958 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC4A1P02730 911 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 C1QAP02745 245 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 AHSGP02765 367 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 MSMBP08118 114 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 TACSTD2P09758 323 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 UBTFL6P0CB48 400 aaPredicted RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 PKMP14618 531 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ANPEPP15144 967 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ST6GAL1P15907 406 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CHRM3P20309 590 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ENDOUP21128 410 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CDH3P22223 829 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 HRH2P25021 359 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CXCR2P25025 360 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 FASP25445 335 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CNTFP26441 200 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CRABP2P29373 138 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CCR7P32248 378 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SHMT2P34897 504 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 PHBP35232 272 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 RPA3P35244 121 aaPredicted RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SPRP35270 261 aaPredicted RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CD79BP40259 229 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ETV4P43268 484 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 MAGEA4P43358 317 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 POU3F4P49335 361 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 RGS4P49798 205 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CLCN7P51798 805 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CSE1LP55060 971 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 DIO3P55073 304 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 GPR85P60893 370 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 CRADDP78560 199 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 HPCAP84074 193 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 BTKQ06187 659 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 PDIA2Q13087 525 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 APOFQ13790 326 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 BOP1Q14137 746 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 ARHGAP19Q14CB8 494 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 FASTKD3Q14CZ7 662 aaKnown RBP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 EFTUD2Q15029 972 aaKnown RBP eCLIP2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 RPE65Q16518 533 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 MSS51Q4VC12 460 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 SFT2D3Q587I9 215 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 HSP90AA5PQ58FG0 334 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 GRTP1Q5TC63 336 aa2.8□□□□□ -1.96
SCARNA13-201ENST00000516672 LGSNQ5TDP6 509 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms