RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SHBQ15464 509 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 LYSMD4Q5XG99 296 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 XAF1Q6GPH4 301 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 TYW3Q6IPR3 259 aaKnown RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 KLHL17Q6TDP4 642 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 VRK2Q86Y07 508 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 ZNF595Q8IYB9 648 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 SPARTQ8N0X7 666 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 MAFAQ8NHW3 353 aaPredicted RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 SLC7A13Q8TCU3 470 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 NR4A3Q92570 626 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 HOXB13Q92826 284 aaPredicted RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 AHCYL2Q96HN2 611 aaKnown RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 SDF2Q99470 211 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 ZNF350Q9GZX5 532 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 MTHFD2LQ9H903 347 aaPredicted RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 VCX3AQ9NNX9 186 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 RSL24D1Q9UHA3 163 aaKnown RBP13.95□□□□□ -0.18
VCAN-211ENST00000513984 MGAT4BQ9UQ53 548 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 IFT52Q9Y366 437 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 WDR45Q9Y484 360 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 CHST2Q9Y4C5 530 aa13.95□□□□□ -0.18
VCAN-211ENST00000513984 SH3PXD2BA1X283 911 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 XPNPEP2O43895 674 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 WBP4O75554 376 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 TDGF1P13385 188 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 FMO3P31513 532 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 BNC1Q01954 994 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 Q6ZPB1 254 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 WDR5BQ86VZ2 330 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 VWA5B2Q8N398 1253 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 OR52P1PQ8NH57 321 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 APH1BQ8WW43 257 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 GTPBP3Q969Y2 492 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 NMD3Q96D46 503 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 PEX11GQ96HA9 241 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 ELF4Q99607 663 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 FNDC11Q9BVV2 318 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 DGCR6LQ9BY27 220 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 DUSP21Q9H596 190 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 PRMT8Q9NR22 394 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 PTTG2Q9NZH5 202 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 MKLN1Q9UL63 735 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 RNF6Q9Y252 685 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 TPRKBQ9Y3C4 175 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 MN1Q10571 1320 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 H0YIG0 161 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 H3BMH7 237 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 TGFBR3LH3BV60 316 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 DUX1O43812 170 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 OR10H2O60403 315 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 CTNSO60931 367 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 COQ9O75208 318 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 CBX7O95931 251 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 AK1P00568 194 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 POU2F1P14859 743 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 AVPR1BP47901 424 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 ARRB1P49407 418 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 SLC35A2P78381 396 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 GPLD1P80108 840 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 TEKQ02763 1124 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 GRM7Q14831 915 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 EXOSC7Q15024 291 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 NEDD8Q15843 81 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 PMS2CLQ68D20 193 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 DGAT2L6Q6ZPD8 337 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 PLXDC1Q8IUK5 500 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 PEX5LQ8IYB4 626 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 LINC00471Q8N535 108 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 DOK4Q8TEW6 326 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 CNDP2Q96KP4 475 aaKnown RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 NODALQ96S42 347 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 RBCK1Q9BYM8 510 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 SAP130Q9H0E3 1048 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 CXorf21Q9HAI6 301 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 IRAK4Q9NWZ3 460 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 AASSQ9UDR5 926 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 FTSJ1Q9UET6 329 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 KLHL3Q9UH77 587 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 ZNF443Q9Y2A4 671 aaPredicted RBP13.94□□□□□ -0.18
VCAN-211ENST00000513984 CLDN16Q9Y5I7 305 aa13.94□□□□□ -0.18
VCAN-211ENST00000513984 OR10H3O60404 316 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 THBS1P07996 1170 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 GNSP15586 552 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 S1PR1P21453 382 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 KRT20P35900 424 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 DHPSP49366 369 aaPredicted RBP13.93□□□□□ -0.18
VCAN-211ENST00000513984 UGT2B15P54855 530 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 CSNK2BP67870 215 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 ZXDAP98168 799 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 MAT1AQ00266 395 aaKnown RBP13.93□□□□□ -0.18
VCAN-211ENST00000513984 CFHR1Q03591 330 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 SLC13A2Q13183 592 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms