RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CFAP58Q5T655 872 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 MLIPQ5VWP3 458 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 RAET1GQ6H3X3 334 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 FAM183BPQ6ZVS7 135 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 CAMKMTQ7Z624 323 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 DNAAF5Q86Y56 855 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 ZNF606Q8WXB4 792 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 TMEM158Q8WZ71 300 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 PGAP3Q96FM1 320 aaPredicted RBP5.6□□□□□ -1.51
USP53-206ENST00000510737 COX14Q96I36 57 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 POM121L2Q96KW2 1035 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 LINC00479Q96M42 142 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 CPXM1Q96SM3 734 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 OPRPNQ99935 248 aaPredicted RBP5.6□□□□□ -1.51
USP53-206ENST00000510737 ABCG8Q9H221 673 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 CUEDC2Q9H467 287 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 SLC40A1Q9NP59 571 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 ACP6Q9NPH0 428 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 ABI3Q9P2A4 366 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 CD84Q9UIB8 345 aa5.6□□□□□ -1.51
USP53-206ENST00000510737 PTRH2Q9Y3E5 179 aaKnown RBP5.6□□□□□ -1.51
USP53-206ENST00000510737 GUCY1B2O75343 617 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 DAB1O75553 588 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 TPOP07202 933 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 COX7A2P14406 83 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 LHCGRP22888 699 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 GABRB2P47870 512 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 TNFSF10P50591 281 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 POLR2LP62875 67 aaKnown RBP5.59□□□□□ -1.51
USP53-206ENST00000510737 MFAP5Q13361 173 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 FGFBP1Q14512 234 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 RAB6CQ53S08 254 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 SPINK14Q6IE38 97 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 RWDD4Q6NW29 188 aaKnown RBP5.59□□□□□ -1.51
USP53-206ENST00000510737 ISLR2Q6UXK2 745 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 C3P1Q6ZMU1 363 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 C11orf57Q6ZUT1 292 aaPredicted RBP5.59□□□□□ -1.51
USP53-206ENST00000510737 SH2D6Q7Z4S9 175 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 ZNF354CQ86Y25 554 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 CDC20BQ86Y33 519 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 DOLPP1Q86YN1 238 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 TTC30BQ8N4P2 665 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 IQUBQ8NA54 791 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 OR8K5Q8NH50 307 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 OR1L3Q8NH93 324 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 SNX21Q969T3 373 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 PTERQ96BW5 349 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 RAB6CQ9H0N0 254 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 ADPRHL2Q9NX46 363 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 IL17CQ9P0M4 197 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 KLHL9Q9P2J3 617 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 SLC23A2Q9UGH3 650 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 NEU3Q9UQ49 428 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 PYGO1Q9Y3Y4 419 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 ZANQ9Y493 2812 aa5.59□□□□□ -1.51
USP53-206ENST00000510737 HRNRQ86YZ3 2850 aaPredicted RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 A0A1W2PPI3 338 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 OR5K3A6NET4 321 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 DUXAA6NLW8 204 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 OR52A4PA6NMU1 304 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 FAM90A26D6RGX4 464 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 LETM1O95202 739 aaPredicted RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 GGT5P36269 586 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 CSNK1DP48730 415 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 SULT1E1P49888 294 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 BCL2L1Q07817 233 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 ITGA9Q13797 1035 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 KIR2DS3Q14952 304 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 KRTCAP3Q53RY4 240 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 DCST1Q5T197 706 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 PLXDC2Q6UX71 529 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 C16orf47Q6ZP98 133 aaPredicted RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 BNIPLQ7Z465 357 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 TSPAN33Q86UF1 283 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 FAM131BQ86XD5 332 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 AVL9Q8NBF6 648 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 ZNF397Q8NF99 534 aaPredicted RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 OR2Y1Q8NGV0 311 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 LILRB4Q8NHJ6 448 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 AGAP11Q8TF27 550 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 PHF10Q8WUB8 498 aaKnown RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 HAS2Q92819 552 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 AP2M1Q96CW1 435 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 RMND5BQ96G75 393 aaPredicted RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 PPM1MQ96MI6 270 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 GPATCH1Q9BRR8 931 aaKnown RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 FUZQ9BT04 418 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 WDR13Q9H1Z4 485 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 LRMDAQ9H2I8 198 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 ATP13A3Q9H7F0 1226 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 RPS10P5Q9NQ39 176 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.58□□□□□ -1.52
USP53-206ENST00000510737 OR12D3Q9UGF7 316 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 FBXL4Q9UKA2 621 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 PADI2Q9Y2J8 665 aa5.58□□□□□ -1.52
USP53-206ENST00000510737 MRPS28Q9Y2Q9 187 aaKnown RBP5.58□□□□□ -1.52
USP53-206ENST00000510737 TRAV17A0A0B4J275 112 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
USP53-206ENST00000510737 NPIPB15A6NHN6 443 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms