RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 ABLIM2Q6H8Q1 611 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 AGTRAPQ6RW13 159 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 CNTN4Q8IWV2 1026 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 RBCK1Q9BYM8 510 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 PTGES2Q9H7Z7 377 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 A8MX80 341 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 NEDD8-MDP1E9PL57 170 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 MAOBP27338 520 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 RPS15AP62244 130 aaKnown RBP7.98□□□□□ -1.13
HTT-208ENST00000510626 DBPQ10586 325 aaPredicted RBP7.98□□□□□ -1.13
HTT-208ENST00000510626 MELKQ14680 651 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 OR10G6Q8NH81 332 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 CASTOR1Q8WTX7 329 aa7.98□□□□□ -1.13
HTT-208ENST00000510626 POLMQ9NP87 494 aaPredicted RBP7.98□□□□□ -1.13
HTT-208ENST00000510626 TMEM221A6NGB7 291 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 FARS2O95363 451 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 PNMTP11086 282 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 DPEP1P16444 411 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ELK1P19419 428 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ETV4P43268 484 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 APOBEC3GQ9HC16 384 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 ARHGEF17Q96PE2 2063 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3EA0A087X179 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3KA0A087X1G2 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3FA6NER0 549 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3LB9A6J9 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 GPRIN2O60269 458 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 STBD1O95210 358 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3HP0C7X1 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ACRV1P26436 265 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SERPINF1P36955 418 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HTR3AP46098 478 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF792Q3KQV3 632 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 EEF1DP3Q658K8 133 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HBMQ6B0K9 141 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3GQ6DHY5 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3CQ6IPX1 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TBC1D3Q8IZP1 549 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 PARP16Q8N5Y8 322 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 OR8S1Q8NH09 359 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PMM1Q92871 262 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 IL12RB2Q99665 862 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TMEM175Q9BSA9 504 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 VNN1O95497 513 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PIPP12273 146 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 CMIPQ8IY22 773 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 OR13F1Q8NGS4 319 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF461Q8TAF7 563 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF275Q9NSD4 429 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 NOTCH3Q9UM47 2321 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF638Q14966 1978 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 SPP1P10451 314 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 BPIP17213 487 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 NUDT6P53370 316 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 NFATC2Q13469 925 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 UBXN2BQ14CS0 331 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 NDUFAF7Q7L592 441 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 POGLUT1Q8NBL1 392 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.97□□□□□ -1.13
HTT-208ENST00000510626 MYLIPQ8WY64 445 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 OR6C6A6NF89 314 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HSPB2A8KAH6 182 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 OR8U9P0C7N5 309 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 CLDN10P78369 228 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ZNF266Q14584 549 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HSPB2Q16082 182 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TPRG1Q6ZUI0 275 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HORMAD2Q8N7B1 307 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PRKCAP17252 672 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TAS2R30P59541 319 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 FAM83HQ6ZRV2 1179 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 IFT22Q9H7X7 185 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SRPX2O60687 465 aaPredicted RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 ICMTO60725 284 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 C1QBP02746 253 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ADCYAP1R1P41586 468 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 GPR68Q15743 365 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 DUSP6Q16828 381 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 TCTE3Q8IZS6 198 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 GPR148Q8TDV2 347 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 HPSE2Q8WWQ2 592 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SDHAF2Q9NX18 166 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PRELID3BQ9Y3B1 194 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 RNF11Q9Y3C5 154 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ADAM18Q9Y3Q7 739 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 WDR45Q9Y484 360 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 SLC22A7Q9Y694 548 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 OR6C74A6NCV1 312 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 DUS3LQ96G46 650 aaKnown RBP7.97□□□□□ -1.13
HTT-208ENST00000510626 BORCS6Q96GS4 357 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 PINK1Q9BXM7 581 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 GALPQ9UBC7 116 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 Q9Y3F1 56 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 ARRDC5A6NEK1 342 aa7.97□□□□□ -1.13
HTT-208ENST00000510626 NIPSNAP2O75323 286 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms