RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 IMPA1P29218 277 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ATP5DP30049 168 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 HPDP32754 393 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 AHRP35869 848 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CASP3P42574 277 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 LHX2P50458 406 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 MECP2P51608 486 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 DVL1P1P54792 670 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 HNRNPH2P55795 449 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 TBPL1P62380 186 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 IL13RA1P78552 427 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ID2Q02363 134 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 TGM3Q08188 693 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FUT7Q11130 342 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 NAE1Q13564 534 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 RUNX2Q13950 521 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CSHL1Q14406 222 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ZNF267Q14586 743 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 PON3Q15166 354 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 STK11Q15831 433 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 NTRK2Q16620 822 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 DPCR1Q3MIW9 517 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ACSBG2Q5FVE4 666 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 XP32Q5T750 250 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 DEPDC1Q5TB30 811 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SLC30A6Q6NXT4 461 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SLC22A25Q6T423 547 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 MFSD7Q6UXD7 560 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 TMEM64Q6YI46 380 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 PPP1R21Q6ZMI0 780 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 C17orf107Q6ZR85 190 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 H2AFVQ71UI9 128 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FKBP9P1Q75LS8 142 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 LINC00523Q86TU6 105 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CDKL3Q8IVW4 592 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 REXO1L1PQ8IX06 675 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SPATA6LQ8N4H0 392 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 TRIM58Q8NG06 486 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 OR6K3Q8NGY3 331 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FNDC9Q8TBE3 224 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SPPL2AQ8TCT8 520 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ZNF721Q8TF20 911 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CTNNBL1Q8WYA6 563 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 GFM2Q969S9 779 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 MAP6Q96JE9 813 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 QKIQ96PU8 341 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNF4-211ENST00000509206 KCNJ15Q99712 375 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 VRK1Q99986 396 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 AIF1LQ9BQI0 150 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SYT11Q9BT88 431 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 CCDC68Q9H2F9 335 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 KLHL31Q9H511 634 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FN3KRPQ9HA64 309 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 FOLH1BQ9HBA9 442 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 MYOZ1Q9NP98 299 aaPredicted RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 PLSCR4Q9NRQ2 329 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 SNX15Q9NRS6 342 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 WWOXQ9NZC7 414 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 UVRAGQ9P2Y5 699 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 XPR1Q9UBH6 696 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 HEY2Q9UBP5 337 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 KLHL21Q9UJP4 597 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 NENFQ9UMX5 172 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 ZDHHC9Q9Y397 364 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 BZW2Q9Y6E2 419 aaKnown RBP3.43□□□□□ -1.86
RNF4-211ENST00000509206 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNF4-211ENST00000509206 HEATR5BQ9P2D3 2071 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 VWFP04275 2813 aa3.43□□□□□ -1.86
RNF4-211ENST00000509206 DPRXA6NFQ7 191 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 LGALS16A8MUM7 142 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 B4DSR2 109 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 E7EVH7 732 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 H7C417 338 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 TIMM23O14925 209 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ERI3O43414 337 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 HCRTR2O43614 444 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SPOPO43791 374 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 LDB3O75112 727 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 NIPSNAP2O75323 286 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 LY6HO94772 140 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SYNGR4O95473 234 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ERCC1P07992 297 aaPredicted RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 SERPINA6P08185 405 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 NUDT17P0C025 328 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 ENO3P13929 434 aaPredicted RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 ZNF708P17019 499 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 DDX5P17844 614 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 PSMB1P20618 241 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 GCH1P30793 250 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SRD5A2P31213 254 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 HNRNPFP52597 415 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 PLA2G16P53816 162 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 CLDN18P56856 261 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 SLC37A1P57057 533 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 RPS13P62277 151 aaKnown RBP3.42□□□□□ -1.86
RNF4-211ENST00000509206 PLIN5Q00G26 463 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 CDH17Q12864 832 aa3.42□□□□□ -1.86
RNF4-211ENST00000509206 BIKQ13323 160 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms