RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CGREF1Q99674 301 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 G6PC3Q9BUM1 346 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.56■□□□□ 0.56
USP53-203ENST00000507597 NXF5Q9H1B4 397 aaKnown RBP18.56■□□□□ 0.56
USP53-203ENST00000507597 GPATCH2Q9NW75 528 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 NDE1Q9NXR1 346 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 TAGLN3Q9UI15 199 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 CBLCQ9ULV8 474 aa18.56■□□□□ 0.56
USP53-203ENST00000507597 C15orf38-AP3S2A0A0A6YYH1 394 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 OR5H15A6NDH6 313 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 TMEM200CA6NKL6 621 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 CT45A8P0DMV1 189 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 CT45A9P0DMV2 189 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 LCN1P31025 176 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 POU6F2P78424 691 aaPredicted RBP18.55■□□□□ 0.56
USP53-203ENST00000507597 PSG6Q00889 435 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 EFR3AQ14156 821 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 GNA13Q14344 377 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 LINC00303Q3SY05 128 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 CT45A2Q5DJT8 189 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 ARPINQ7Z6K5 226 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 HOXB13Q92826 284 aaPredicted RBP18.55■□□□□ 0.56
USP53-203ENST00000507597 TMCO6Q96DC7 493 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 CRELD1Q96HD1 420 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 HOPXQ9BPY8 73 aaPredicted RBP18.55■□□□□ 0.56
USP53-203ENST00000507597 BTBD2Q9BX70 525 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 LIN28AQ9H9Z2 209 aaKnown RBP18.55■□□□□ 0.56
USP53-203ENST00000507597 HHATLQ9HCP6 504 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 GMEB1Q9Y692 573 aa18.55■□□□□ 0.56
USP53-203ENST00000507597 ASPDHA6ND91 283 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 REM1O75628 298 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 ESRRAP11474 423 aaPredicted RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 CD46P15529 392 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 ATP6V1C1P21283 382 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 ABCD3P28288 659 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 CRATP43155 626 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 PNLIPRP2P54317 469 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 GAB1Q13480 694 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 ASB18Q6ZVZ8 466 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 TRPM8Q7Z2W7 1104 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 NUP54Q7Z3B4 507 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 CYP4Z2PQ8N1L4 340 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 POU5F2Q8N7G0 328 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 SLC16A11Q8NCK7 471 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 LSM14AQ8ND56 463 aaKnown RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 SIMC1Q8NDZ2 872 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 SPACA9Q96E40 222 aaPredicted RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 OR7D2Q96RA2 312 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 SECISBP2Q96T21 854 aaKnown RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 YIPF4Q9BSR8 244 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 THUMPD3Q9BV44 507 aaKnown RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 TRIM4Q9C037 500 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 TRIM45Q9H8W5 580 aaPredicted RBP18.54■□□□□ 0.56
USP53-203ENST00000507597 TIMMDC1Q9NPL8 285 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 LRFN1Q9P244 771 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 LIPT1Q9Y234 373 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 DTX4Q9Y2E6 619 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 PCSK5Q92824 1860 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 PTPRQQ9UMZ3 2332 aa18.54■□□□□ 0.56
USP53-203ENST00000507597 OR6C70A6NIJ9 312 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 FBP2O00757 339 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 AIM2O14862 343 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 PPM1BO75688 479 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 WDPCPO95876 746 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 FBXO45P0C2W1 286 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 FAM87AP0C7U9 286 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 PIGAP37287 484 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 MAP3K8P41279 467 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 CLK3P49761 638 aaKnown RBP18.53■□□□□ 0.56
USP53-203ENST00000507597 CBX1P83916 185 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 HPCAP84074 193 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 IL20RBQ6UXL0 311 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 DLEU7Q6UYE1 221 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 RTL4Q6ZR62 310 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 C16orf62Q7Z3J2 963 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 RNF130Q86XS8 419 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 TREML1Q86YW5 311 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 FITM2Q8N6M3 262 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 GOLM1Q8NBJ4 401 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 XAGE5Q8WWM1 108 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 LRRC58Q96CX6 371 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 OMA1Q96E52 524 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 C16orf58Q96GQ5 468 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 NSL1Q96IY1 281 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 C5orf34Q96MH7 638 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 ANKRD27Q96NW4 1050 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 UBL7Q96S82 380 aaPredicted RBP18.53■□□□□ 0.56
USP53-203ENST00000507597 NPAS2Q99743 824 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 SLC25A18Q9H1K4 315 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 OR51I1Q9H343 314 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 IL1RL2Q9HB29 575 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 CALML5Q9NZT1 146 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 VAPAQ9P0L0 249 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 MAP10Q9P2G4 905 aa18.53■□□□□ 0.56
USP53-203ENST00000507597 TRAV17A0A0B4J275 112 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 ACP2P11117 423 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 CALB2P22676 271 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 SOX3P41225 446 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 CORO7P57737 925 aa18.52■□□□□ 0.56
USP53-203ENST00000507597 MXRA7P84157 204 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms