RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 RPS19BP1Q86WX3 136 aaKnown RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CALHM3Q86XJ0 350 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 PTOV1Q86YD1 416 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 KBTBD2Q8IY47 623 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 HORMAD2Q8N7B1 307 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CCDC197Q8NCU1 140 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 MDS2Q8NDY4 140 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 NUP43Q8NFH3 380 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 OR5D16Q8NGK9 328 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 APOBEC4Q8WW27 367 aaKnown RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 HAS2Q92819 552 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 HGDQ93099 445 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 LRRC58Q96CX6 371 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 RCN3Q96D15 328 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 ZG16BQ96DA0 208 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 ABHD17AQ96GS6 310 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 LCORQ96JN0 433 aaPredicted RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 ZNF583Q96ND8 569 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 FRMD6Q96NE9 622 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 MS4A4EQ96PG1 132 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 BBC3Q96PG8 261 aaPredicted RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 SIGLEC12Q96PQ1 595 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 PANX1Q96RD7 426 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CGREF1Q99674 301 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CNPPD1Q9BV87 410 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 SAP130Q9H0E3 1048 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 PIGUQ9H490 435 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 RUBCNLQ9H714 662 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 NANOGQ9H9S0 305 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 TPT1P8Q9HAU6 139 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 DUSP22Q9NRW4 184 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 ZCCHC3Q9NUD5 404 aaKnown RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 MRGBPQ9NV56 204 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 GMPR2Q9P2T1 348 aaKnown RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 USP22Q9UPT9 525 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 NDUFAF1Q9Y375 327 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CHCHD2Q9Y6H1 151 aaPredicted RBP4.56□□□□□ -1.68
LMNB1-208ENST00000504788 CAPN7Q9Y6W3 813 aa4.56□□□□□ -1.68
LMNB1-208ENST00000504788 MED12Q93074 2177 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RNF103-CHMP3A0A140T963 221 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 C2orf92A0A1B0GVN3 265 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 GXYLT2A0PJZ3 443 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 C17orf51A8MQB3 221 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BBIP1A8MTZ0 92 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 PEX12O00623 359 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 NME4O00746 187 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CDK2AP1O14519 115 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 FADS1O60427 444 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 FCMRO60667 390 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 UGT2B11O75310 529 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BCAS2O75934 225 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 DCTN3O75935 186 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 ZFAND5O76080 213 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 OR6B1O95007 311 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 KCNK2O95069 426 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CPSF4O95639 269 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 WDPCPO95876 746 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 EPPINO95925 133 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 ALPPP05187 535 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 GUSBP08236 651 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 FBXO45P0C2W1 286 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 TNNI3P19429 210 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 PIGAP37287 484 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CD96P40200 585 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 SOX3P41225 446 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 ST13P50502 369 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RRADP55042 308 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CASP9P55211 416 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 PCBP3P57721 371 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 KCNK10P57789 538 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CBX1P83916 185 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 FOXO1Q12778 655 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BNIP1Q12981 228 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 MFAP5Q13361 173 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CAPRIN1Q14444 709 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RPS6KA2Q15349 733 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RGNQ15493 299 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 NTRK2Q16620 822 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 TRMT5Q32P41 509 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BORAQ6PGQ7 559 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BNC2Q6ZN30 1099 aaPredicted RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 LRRC69Q6ZNQ3 347 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 OLIG3Q7RTU3 272 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 TRPM8Q7Z2W7 1104 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RNF130Q86XS8 419 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 SLC15A3Q8IY34 581 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 BEST3Q8N1M1 668 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 RBMXL3Q8N7X1 1067 aaKnown RBP4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CDRT4Q8N9R6 151 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 Q8NA96 180 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 CLEC1AQ8NC01 280 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 OR56A1Q8NGH5 318 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 OR52N2Q8NGI0 321 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 OR4A15Q8NGL6 344 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 ZFP28Q8NHY6 868 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 PAQR8Q8TEZ7 354 aa4.55□□□□□ -1.68
LMNB1-208ENST00000504788 THAP3Q8WTV1 239 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms