RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	LIX1L	Q8IVB5	337 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	PLPP6	Q8IY26	295 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CFAP206	Q8IYR0	622 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	MTMR14	Q8NCE2	650 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ADAMTS19	Q8TE59	1207 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF707	Q96C28	371 aa	Predicted RBP	10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CPNE2	Q96FN4	548 aa	Predicted RBP	10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	RNF32	Q9H0A6	362 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	QRSL1	Q9H0R6	528 aa	Known RBP	10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	DDX31	Q9H8H2	851 aa	Known RBP	10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	POLM	Q9NP87	494 aa	Predicted RBP	10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	TNFRSF10D	Q9UBN6	386 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	CHST2	Q9Y4C5	530 aa		10.03	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF646	O15015	1829 aa	Predicted RBP	10.02	□□□□□ -0.8
TRAPPC12-223	ENST00000497597	ZNF593	O00488	134 aa	Predicted RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	IGLV3-25	P01717	112 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	IGHA2	P01877	340 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ANKRD34C	P0C6C1	535 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PRG2	P13727	222 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ANXA7	P20073	488 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AHCY	P23526	432 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ELAVL4	P26378	380 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AOAH	P28039	575 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CCR7	P32248	378 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GPR4	P46093	362 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ASMT	P46597	345 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RFX3	P48380	749 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FGL1	Q08830	312 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RIN1	Q13671	783 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AFMID	Q63HM1	303 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	QSOX2	Q6ZRP7	698 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	DGLUCY	Q7Z3D6	616 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	THOC6	Q86W42	341 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	HDDC3	Q8N4P3	179 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CLRN3	Q8NCR9	226 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR13C5	Q8NGS8	318 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	KIAA1143	Q96AT1	154 aa	Predicted RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ARSG	Q96EG1	525 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TRIB3	Q96RU7	358 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	POT1	Q9NUX5	634 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PIM2	Q9P1W9	311 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	HECA	Q9UBI9	543 aa	Predicted RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FBXW2	Q9UKT8	454 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AK6	Q9Y3D8	172 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	NUBP2	Q9Y5Y2	271 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	KCNMB2	Q9Y691	235 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SCN4A	P35499	1836 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ASCC3	Q8N3C0	2202 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FAM170B	A6NMN3	283 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TTLL8	A6PVC2	850 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	KRBOX1	C9JBD0	128 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	QSOX1	O00391	747 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MAGEB4	O15481	346 aa	Predicted RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PRMT3	O60678	531 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC19A2	O60779	497 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FZD7	O75084	574 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	NDUFS6	O75380	124 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	IDS	P22304	550 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GABRA5	P31644	462 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC1A3	P43003	542 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CLDN12	P56749	244 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TNFRSF17	Q02223	184 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CCSMST1	Q4G0I0	132 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CD276	Q5ZPR3	534 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FCRLB	Q6BAA4	426 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	REEP3	Q6NUK4	255 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RPTN	Q6XPR3	784 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	METTL3	Q86U44	580 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLITRK4	Q8IW52	837 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ZNF614	Q8N883	585 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	BBS1	Q8NFJ9	593 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR52B4	Q8NGK2	314 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR5D16	Q8NGK9	328 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR2T4	Q8NH00	348 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WDR48	Q8TAF3	677 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	KLK6	Q92876	244 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	EID2B	Q96D98	161 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FAM46A	Q96IP4	442 aa	Known RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ZNF578	Q96N58	590 aa	Predicted RBP	10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MGME1	Q9BQP7	344 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CRB3	Q9BUF7	120 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TEX12	Q9BXU0	123 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PLA2G12A	Q9BZM1	189 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MTG2	Q9H4K7	406 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CSNK1G1	Q9HCP0	422 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC22A11	Q9NSA0	550 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLCO1C1	Q9NYB5	712 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	IRAK3	Q9Y616	596 aa		10.02	□□□□□ -0.81
TRAPPC12-223	ENST00000497597		A0A1B0GVI7	797 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	C17orf102	A2RUQ5	167 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SCN2B	O60939	215 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ERAL1	O75616	437 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SOD1	P00441	154 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	HMGB2	P26583	209 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	STXBP1	P61764	594 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	BTG1	P62324	171 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CAMK1	Q14012	370 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PUM1	Q14671	1186 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC25A35	Q3KQZ1	300 aa		10.01	□□□□□ -0.81

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