RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	SORD	Q00796	357 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TLE2	Q04725	743 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SRSF11	Q05519	484 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ITPK1	Q13572	414 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GTF2H2	Q13888	395 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF674	Q2M3X9	581 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SLC25A52	Q3SY17	297 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C1orf189	Q5VU69	101 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GTF2H2C	Q6P1K8	395 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF783	Q6ZMS7	281 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CNTN4	Q8IWV2	1026 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CD300LF	Q8TDQ1	290 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ST7L	Q8TDW4	575 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RRNAD1	Q96FB5	475 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	COPS8	Q99627	209 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	AP5M1	Q9H0R1	490 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PRO1933	Q9H354	126 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NUDT4	Q9NZJ9	180 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MRPL15	Q9P015	296 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FZD10	Q9ULW2	581 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SNED1	Q8TER0	1413 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CIT	O14578	2027 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF705G	A8MUZ8	300 aa	Predicted RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HLA-DQB1	P01920	261 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	THBS1	P07996	1170 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TNFSF9	P41273	254 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CRYBB2	P43320	205 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SRP9	P49458	86 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DAOA	P59103	153 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLDN10	P78369	228 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PAFAH1B3	Q15102	231 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GSG1	Q2KHT4	349 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LIPN	Q5VXI9	398 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR5M10	Q6IEU7	315 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR52W1	Q6IF63	320 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LDLRAD3	Q86YD5	345 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PLA2G15	Q8NCC3	412 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HAVCR1	Q96D42	359 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LINGO1	Q96FE5	620 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MED8	Q96G25	268 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PEX11G	Q96HA9	241 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MRGPRX2	Q96LB1	330 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FCRL4	Q96PJ5	515 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OSMR	Q99650	979 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TRPV4	Q9HBA0	871 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CFAP20	Q9Y6A4	193 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	USP54	Q70EL1	1684 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549		A0A1B0GUH1	482 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549		A0A1B0GVC2	190 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549		A6NIN4	97 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RFPL4A	A6NLU0	287 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RFPL4AL1	F8VTS6	287 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PEX10	O60683	326 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ADAMTS4	O75173	837 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	UBL3	O95164	117 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	EBLN1	P0CF75	366 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GNS	P15586	552 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PBLD	P30039	288 aa	Predicted RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NHLH2	Q02577	135 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RBBP4	Q09028	425 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LRRC37A5P	Q49AS3	106 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZRANB3	Q5FWF4	1079 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HBM	Q6B0K9	141 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FAHD1	Q6P587	224 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SZRD1	Q7Z422	152 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NKAIN4	Q8IVV8	208 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NANOGP1	Q8N7R0	232 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RNF141	Q8WVD5	230 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	APH1B	Q8WW43	257 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLP1	Q92989	425 aa	Known RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TMEM134	Q9H6X4	195 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NT5M	Q9NPB1	228 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MYOZ2	Q9NPC6	264 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PLEKHB1	Q9UF11	243 aa	Predicted RBP	7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLEC2D	Q9UHP7	191 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PIAS3	Q9Y6X2	628 aa		7.76	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TRDV1	A0A1B0GX56	115 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HMSD	A8MTL9	139 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF593	O00488	134 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GABRD	O14764	452 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SUSD5	O60279	629 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TPST2	O60704	377 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NME6	O75414	186 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PRKRA	O75569	313 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NCR1	O76036	304 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OPN1SW	P03999	348 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HIST1H2AB	P04908	130 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C1GALT1C1L	P0DN25	315 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ELK1	P19419	428 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SDHA	P31040	664 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DLST	P36957	453 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ADH7	P40394	386 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CRKL	P46109	303 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RENBP	P51606	427 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C21orf58	P58505	322 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PRR5	P85299	388 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SMAD4	Q13485	552 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	UBXN2B	Q14CS0	331 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	UGCG	Q16739	394 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	NDUFA9	Q16795	377 aa		7.75	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms