RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 POLE4Q9NR33 117 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 ZNF624Q9P2J8 865 aaPredicted RBP14.39□□□□□ -0.11
CALD1-222ENST00000495522 DIMT1Q9UNQ2 313 aaKnown RBP14.39□□□□□ -0.11
CALD1-222ENST00000495522 NCKAP1Q9Y2A7 1128 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 MYL12BO14950 172 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 TBX1O43435 398 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 RAB36O95755 333 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 SLC35G6P0C7Q6 338 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 IFNA8P32881 189 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 KIF18BQ86Y91 864 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 CACTIN-AS1Q8N1I8 211 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 LRRC25Q8N386 305 aaPredicted RBP14.39□□□□□ -0.11
CALD1-222ENST00000495522 PARP16Q8N5Y8 322 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 TEX47Q8TBZ9 253 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 C10orf90Q96M02 699 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 ZNF582Q96NG8 517 aaPredicted RBP14.39□□□□□ -0.11
CALD1-222ENST00000495522 NUAK2Q9H093 628 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
CALD1-222ENST00000495522 KLHL28Q9NXS3 571 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 SEC14L4Q9UDX3 406 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 PHF11Q9UIL8 331 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 PCOLCE2Q9UKZ9 415 aa14.39□□□□□ -0.11
CALD1-222ENST00000495522 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 TICRRQ7Z2Z1 1910 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 PNMA8CA0A1B0GUJ8 204 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 DUXAA6NLW8 204 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 PSMA1P25786 263 aaKnown RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 PRKAR1BP31321 381 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 ETV6P41212 452 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 EFNB1P98172 346 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 TNFRSF17Q02223 184 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 MLLT11Q13015 90 aaPredicted RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 KIR2DS3Q14952 304 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 SNAPC1Q16533 368 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 USP30Q70CQ3 517 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 SAMD14Q8IZD0 417 aaPredicted RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 OR52I1Q8NGK6 324 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 OR9Q1Q8NGQ5 310 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 ADAMTS15Q8TE58 950 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 DIO2Q92813 273 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 ZG16BQ96DA0 208 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 ITPKCQ96DU7 683 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 MS4A4EQ96PG1 132 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 CNPPD1Q9BV87 410 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 POLR2J2Q9GZM3 115 aaKnown RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 NDUFB11Q9NX14 153 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 ZNF229Q9UJW7 825 aa14.38□□□□□ -0.11
CALD1-222ENST00000495522 GPR55Q9Y2T6 319 aaPredicted RBP14.38□□□□□ -0.11
CALD1-222ENST00000495522 CPSF4LA6NMK7 179 aaKnown RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 FRS3O43559 492 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 EGFP01133 1207 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 HBQ1P09105 142 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CCNYL3P0C7X3 344 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CPN2P22792 545 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 ACTR1BP42025 376 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 ACTR1AP61163 376 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CDC20Q12834 499 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 TSPAN31Q12999 210 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SUZ12Q15022 739 aaKnown RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 FAM214AQ32MH5 1076 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SPANXN2Q5MJ10 180 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 STEAP3Q658P3 488 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SLC27A4Q6P1M0 643 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 ZNF730Q6ZMV8 503 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CADM3Q8N126 398 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 FGF11Q92914 225 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 TSACCQ96A04 125 aaPredicted RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 SLC35A4Q96G79 324 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 PRR14Q9BWN1 585 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 PLA2G12AQ9BZM1 189 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 EGLN3Q9H6Z9 239 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 NTMQ9P121 344 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CRNNQ9UBG3 495 aaPredicted RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 TESQ9UGI8 421 aaKnown RBP14.37□□□□□ -0.11
CALD1-222ENST00000495522 STUB1Q9UNE7 303 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CA5BQ9Y2D0 317 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 A0A075B6Q4 140 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 GSAPA4D1B5 854 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 SNTNA6NMZ2 147 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 H0Y8X5 98 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 APBB3O95704 486 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 AGR2O95994 175 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 KLHL22Q53GT1 634 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 C6orf132Q5T0Z8 1188 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 HEPHL1Q6MZM0 1159 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 MFSD12Q6NUT3 480 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 CDC73Q6P1J9 531 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 FBXO42Q6P3S6 717 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 FAM111BQ6SJ93 734 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 RRM2BQ7LG56 351 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 DGLUCYQ7Z3D6 616 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 OR7G2Q8NG99 324 aa14.37□□□□□ -0.11
CALD1-222ENST00000495522 OR52P1PQ8NH57 321 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms