RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CTBP2P56545 445 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 FCHO2Q0JRZ9 810 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 IRF4Q15306 451 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 FAHD1Q6P587 224 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 PRR23CQ6ZRP0 262 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 COX18Q8N8Q8 333 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 CAMK1GQ96NX5 476 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 COQ7Q99807 217 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 LRRN3Q9H3W5 708 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 C3orf14Q9HBI5 128 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 OR10H1Q9Y4A9 318 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
GPC1-209ENST00000495100 ZNF888P0CJ79 500 aaPredicted RBP12.66□□□□□ -0.38
GPC1-209ENST00000495100 BCL6P41182 706 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 MTNR1AP48039 350 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PRR5P85299 388 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SCN1BQ07699 218 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 KCNC3Q14003 757 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TBCEQ15813 527 aaPredicted RBP12.66□□□□□ -0.38
GPC1-209ENST00000495100 CST6Q15828 149 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SLC27A4Q6P1M0 643 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 COMTD1Q86VU5 262 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 LINC01555Q8NAE3 123 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 OR8J1Q8NGP2 316 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TRIM45Q9H8W5 580 aaPredicted RBP12.66□□□□□ -0.38
GPC1-209ENST00000495100 IL21RQ9HBE5 538 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
GPC1-209ENST00000495100 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 A0A0B4J203 849 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 IQCMA0A1B0GVH7 501 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 KMOO15229 486 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 DNAJB6O75190 326 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 AIFM1O95831 613 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TIMP1P01033 207 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 CHRM4P08173 479 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 ALAS2P22557 587 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 MAOBP27338 520 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SSX1Q16384 188 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 ZNF793Q6ZN11 406 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 ESPNLQ6ZVH7 1005 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SERPINA12Q8IW75 414 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 DENND6BQ8NEG7 585 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 OR2L2Q8NH16 312 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PIGXQ8TBF5 258 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PMEPA1Q969W9 287 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SERHL2Q9H4I8 314 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SP140LQ9H930 580 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 RMI1Q9H9A7 625 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PRSS16Q9NQE7 514 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 SLC7A7Q9UM01 511 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 CELSR3Q9NYQ7 3312 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 DOCK8Q8NF50 2099 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 A0A1W2PR48 441 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 DAPL1A0PJW8 107 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 OLFM2O95897 454 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 CPMP14384 443 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TAS2R38P59533 333 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TUBA1BP68363 451 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 DUSP2Q05923 314 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PRRT3Q5FWE3 981 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 PGBD2Q6P3X8 592 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 TUBA1AQ71U36 451 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 Q8N402 240 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 UFD1Q92890 307 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 FAM210AQ96ND0 272 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 MND1Q9BWT6 205 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 STOML2Q9UJZ1 356 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 NOTCH4Q99466 2003 aa12.66□□□□□ -0.38
GPC1-209ENST00000495100 OR6C74A6NCV1 312 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 NPC1O15118 1278 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 DOK2O60496 412 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 HCN1O60741 890 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 GUCY1B2O75343 617 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 HBQ1P09105 142 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 DRD5P21918 477 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 PYCR1P32322 319 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 TALDO1P37837 337 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 ZNF155Q12901 538 aaPredicted RBP12.65□□□□□ -0.38
GPC1-209ENST00000495100 SMAD2Q15796 467 aaKnown RBP12.65□□□□□ -0.38
GPC1-209ENST00000495100 ZNF77Q15935 545 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 KIAA1211LQ6NV74 962 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 UNC5DQ6UXZ4 953 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 NLRP8Q86W28 1048 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 RBM12BQ8IXT5 1001 aaKnown RBP12.65□□□□□ -0.38
GPC1-209ENST00000495100 SIX5Q8N196 739 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 SAMD12Q8N8I0 201 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 PTCHD1Q96NR3 888 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 NEUROD4Q9HD90 331 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 MYNNQ9NPC7 610 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 TRIM64CA6NLI5 447 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 NDUFB5O43674 189 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 MOSPD3O75425 235 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 CLUP10909 449 aa12.65□□□□□ -0.38
GPC1-209ENST00000495100 HSD3B1P14060 373 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms