RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TCTN2Q96GX1 697 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 NODALQ96S42 347 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CD180Q99467 661 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 IER2Q9BTL4 223 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 DGCR6LQ9BY27 220 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 LHPPQ9H008 270 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 RAB33BQ9H082 229 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 PIGUQ9H490 435 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SLC24A3Q9HC58 644 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 CCNB1IP1Q9NPC3 277 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 FKBP14Q9NWM8 211 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF226Q9NYT6 803 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 ERVK-18Q9QC07 812 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 REV1Q9UBZ9 1251 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 TMCC3Q9ULS5 477 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 PLCL2Q9UPR0 1127 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 SATB2Q9UPW6 733 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 MGAT4BQ9UQ53 548 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 TPRKBQ9Y3C4 175 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 PCDHGA10Q9Y5H3 936 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 RNF215Q9Y6U7 377 aa9.95□□□□□ -0.82
CLCN6-208ENST00000494028 MN1Q10571 1320 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 IGHV5-51A0A0C4DH38 117 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 TRIM64BA6NI03 449 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DUXAA6NLW8 204 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 H3BMQ9 156 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 FRS3O43559 492 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 MRPS14O60783 128 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 COQ9O75208 318 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 NSA2O95478 260 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 GASTP01350 101 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 TP53P04637 393 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 ALOX5P09917 674 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 GIMD1P0DJR0 217 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 POU2F1P14859 743 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CSF2RBP32927 897 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 MAP3K8P41279 467 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CXCL12P48061 93 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CSNK1EP49674 416 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 C21orf59P57076 290 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 IGLV3-21P80748 117 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 PIN1Q13526 163 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 EXOSC7Q15024 291 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 NDUFA9Q16795 377 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 ZNF311Q5JNZ3 666 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DCST2Q5T1A1 773 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 GPR107Q5VW38 600 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 MLIPQ5VWP3 458 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 SLX4IPQ5VYV7 408 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 PODNL1Q6PEZ8 512 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DGAT2L6Q6ZPD8 337 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 UBALD2Q8IYN6 164 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DEPDC4Q8N2C3 294 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 OR6C4Q8NGE1 309 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 OR52P1PQ8NH57 321 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 SLC7A13Q8TCU3 470 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 NR4A3Q92570 626 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 COG8Q96MW5 612 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 NECAB3Q96P71 396 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 TGM7Q96PF1 710 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 STACQ99469 402 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 UCK2Q9BZX2 261 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CHRNA10Q9GZZ6 450 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DUSP15Q9H1R2 295 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 TRIM45Q9H8W5 580 aaPredicted RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 LIN28AQ9H9Z2 209 aaKnown RBP9.94□□□□□ -0.82
CLCN6-208ENST00000494028 DUSP22Q9NRW4 184 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 RASSF1Q9NS23 344 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 SOHLH2Q9NX45 425 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 EPHA6Q9UF33 1036 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 NDOR1Q9UHB4 597 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 WDR45Q9Y484 360 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 PCDHGB1Q9Y5G3 927 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 CLDN16Q9Y5I7 305 aa9.94□□□□□ -0.82
CLCN6-208ENST00000494028 A0A1B0GVT2 93 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 FITM1A5D6W6 292 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 TMX2-CTNND1H3BSU7 103 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 BCAT2O15382 392 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 RGS10O43665 173 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 OR10H3O60404 316 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 FCMRO60667 390 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SRPX2O60687 465 aaPredicted RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 TPST2O60704 377 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SOX14O95416 240 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 FADS2O95864 444 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 AK1P00568 194 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 THBS1P07996 1170 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 SLC35E2P0CK97 266 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 OSMP13725 252 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 CTSKP43235 329 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 MAP2K4P45985 399 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 IDH2P48735 452 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 AFF3P51826 1226 aaKnown RBP9.93□□□□□ -0.82
CLCN6-208ENST00000494028 NUDT6P53370 316 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 CRISP1P54107 249 aa9.93□□□□□ -0.82
CLCN6-208ENST00000494028 RGS8P57771 180 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms