RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PPWD1Q96BP3 646 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 BOD1Q96IK1 185 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 WDR92Q96MX6 357 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CLUHP3Q96NS8 147 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TEFMQ96QE5 360 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 LGR4Q9BXB1 951 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 SEMA6CQ9H3T2 930 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 EIF2B3Q9NR50 452 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GPR27Q9NS67 375 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 VAPAQ9P0L0 249 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 XPR1Q9UBH6 696 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 PCYOX1Q9UHG3 505 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 ANAPC2Q9UJX6 822 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 RNF11Q9Y3C5 154 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 KCTD3Q9Y597 815 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TMEM202A6NGA9 273 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 B2RBV5 119 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 KDM4EB2RXH2 506 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 H7BY64 318 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GPR39O43194 453 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 SOD1P00441 154 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 PF4V1P10720 104 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 LPOP22079 712 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 EPHA8P29322 1005 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 SESN2P58004 480 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 ACSM1Q08AH1 577 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GANABQ14697 944 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 MICBQ29980 383 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CDNFQ49AH0 187 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CERCAMQ5T4B2 595 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 MEDAGQ5VYS4 303 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 ANKRD22Q5VYY1 191 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GPR155Q7Z3F1 870 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 PIWIL3Q7Z3Z3 882 aaKnown RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 C12orf45Q8N5I9 185 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 CAMKVQ8NCB2 501 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 OR4K2Q8NGD2 314 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 ADAMTS14Q8WXS8 1223 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TSACCQ96A04 125 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TRIM51Q9BSJ1 452 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 TOLLIPQ9H0E2 274 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 FGF22Q9HCT0 170 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 RAD18Q9NS91 495 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 OLAHQ9NV23 265 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 IL17CQ9P0M4 197 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 FKBPLQ9UIM3 349 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GPR55Q9Y2T6 319 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-222ENST00000493919 MMACHCQ9Y4U1 282 aa10.94□□□□□ -0.66
BRCA1-222ENST00000493919 GLYATL1P3A0A0U1RQE8 302 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 A0A1W2PPL8 197 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 DNASE2O00115 360 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 BTN3A3O00478 584 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 CCL22O00626 93 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 GSTA4O15217 222 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 MITFO75030 526 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 SRP72O76094 671 aaKnown RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PRAMEF1O95521 474 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 C1QBP02746 253 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 JUNDP17535 347 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 TPSB2P20231 275 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 NT5EP21589 574 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF140P52738 457 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PTK6Q13882 451 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PLCL1Q15111 1095 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 TPSAB1Q15661 275 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PNLIPRP3Q17RR3 467 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 RSPO4Q2I0M5 234 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 FAM83EQ2M2I3 478 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF468Q5VIY5 522 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 HACD4Q5VWC8 232 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 ADAMTSL4Q6UY14 1074 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 CERS6Q6ZMG9 384 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 CPNE9Q8IYJ1 553 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PHACTR4Q8IZ21 702 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 FBXW8Q8N3Y1 598 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 SVOPQ8N4V2 548 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 OR56A4Q8NGH8 313 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 OR13F1Q8NGS4 319 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 RHOXF1Q8NHV9 184 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PHF10Q8WUB8 498 aaKnown RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 MRGPRX4Q96LA9 322 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 TRIM31Q9BZY9 425 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 TCEAL2Q9H3H9 227 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 KCNK9Q9NPC2 374 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 H2AFY2Q9P0M6 372 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 GOLT1BQ9Y3E0 138 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PCDHGB6Q9Y5F9 930 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PCDHGB2Q9Y5G2 931 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PCDHGA7Q9Y5G6 932 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 PCDHGA6Q9Y5G7 932 aa10.93□□□□□ -0.66
BRCA1-222ENST00000493919 TDRD6O60522 2096 aaKnown RBP10.93□□□□□ -0.66
BRCA1-222ENST00000493919 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ASCC3Q8N3C0 2202 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FAM234BA2RU67 622 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PRR23D1E9PI22 279 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TMX2-CTNND1H3BSU7 103 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FOXE1O00358 373 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 LDB2O43679 373 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms