RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 MYO7BQ6PIF6 2116 aa11.3□□□□□ -0.6
UPF3A-210ENST00000493727 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 IGLV3-12A0A075B6K2 115 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 BBIP1A8MTZ0 92 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CAPN14A8MX76 684 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 MASP2O00187 686 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 OR10H2O60403 315 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 TBX19O60806 448 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 LDB3O75112 727 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 JRKO75564 520 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 UBOX5O94941 541 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 BMP10O95393 424 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 HEXBP07686 556 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZGLP1P0C6A0 271 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 C8orf89P0DMQ9 161 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CAPN3P20807 821 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 EFNA1P20827 205 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 FEN1P39748 380 aaKnown RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CPA2P48052 419 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 NCBP2P52298 156 aaKnown RBP eCLIP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 HNRNPFP52597 415 aaKnown RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 MXRA7P84157 204 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ID2Q02363 134 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 FOLH1Q04609 750 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 MFAP5Q13361 173 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 MAPKAPK3Q16644 382 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZNF385BQ569K4 471 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 VWA2Q5GFL6 755 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 REP15Q6BDI9 236 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 FAM180BQ6P0A1 224 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 SHISA6Q6ZSJ9 500 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CCDC121Q6ZUS5 278 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CAMKMTQ7Z624 323 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ANKRD46Q86W74 232 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZDHHC13Q8IUH4 622 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 OR4N5Q8IXE1 308 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 SAMD14Q8IZD0 417 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 SHISA5Q8N114 240 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 OR8J2Q8NGG1 315 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZFP28Q8NHY6 868 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 RP9Q8TA86 221 aaKnown RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 TSPEARQ8WU66 669 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 UCN3Q969E3 161 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CIDECQ96AQ7 238 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZBED6CLQ96FA7 236 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZNF764Q96H86 408 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 NSL1Q96IY1 281 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 TUBB6Q9BUF5 446 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ZBTB20Q9HC78 741 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 ARL8BQ9NVJ2 186 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 FAM120CQ9NX05 1096 aaKnown RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 LEF1Q9UJU2 399 aaPredicted RBP11.29□□□□□ -0.6
UPF3A-210ENST00000493727 C3orf18Q9UK00 162 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 PCDHGB4Q9UN71 923 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 CPAMD8Q8IZJ3 1885 aa11.29□□□□□ -0.6
UPF3A-210ENST00000493727 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 A0A1W2PP18 115 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 A0A1W2PRB8 838 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 WASHC1A8K0Z3 465 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 MRASO14807 208 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 RRP9O43818 475 aaKnown RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 FGF17O60258 216 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 CTNSO60931 367 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 GPR75O95800 540 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 CYC1P08574 325 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 CSNK2A2P19784 350 aaPredicted RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 VAMP1P23763 118 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 ADMP35318 185 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 SOAT1P35610 550 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 XKP51811 444 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 MNAT1P51948 309 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 HSD17B7P56937 341 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 PLIN5Q00G26 463 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 C6orf163Q5TEZ5 329 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 RPUSD3Q6P087 351 aaKnown RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 FAM180AQ6UWF9 173 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 MSANTD1Q6ZTZ1 278 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 NDUFAF7Q7L592 441 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 KBTBD2Q8IY47 623 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 LRRC25Q8N386 305 aaPredicted RBP11.28□□□□□ -0.6
UPF3A-210ENST00000493727 PCYOX1LQ8NBM8 494 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 OR4A15Q8NGL6 344 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 METTL21AQ8WXB1 218 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 COQ8BQ96D53 544 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 ITCHQ96J02 903 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 RHOVQ96L33 236 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 PTCHD1Q96NR3 888 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 NPAS2Q99743 824 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 LANCL2Q9NS86 450 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 CES1P1Q9UKY3 287 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 MED13LQ71F56 2210 aa11.28□□□□□ -0.6
UPF3A-210ENST00000493727 ITPR3Q14573 2671 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms